Job Description P32141 Confidence 100.00% Date Thu Jan 5 11:49:28 GMT 2012 Rank 4 Aligned Residues 242 % Identity 17% Template c3gndC_ PDB info PDB header:lyase Chain: C: PDB Molecule:aldolase lsrf; PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate Resolution 2.90 Å

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		3	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		K	Y	T	I	N	D	I	T	R	A	.	S	G	G	F	A	M	L	A	V	D	Q	R	E	A	M	R	M	M	F	A	A	A	G	A	P	A	P	V	A	D	S	V	L	T	D	F	K	V	N	A	A	K	A	L	S	P	Y	A	S	A	I	L	V	D	Q	Q	F	C	Y	R	Q	V	V	E	Q	N	A	I	A
Query Conservation												.
Alig confidence												.												.	.	.	.	.	.	.	.									.	.	.	.															.												.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.									.	.	.	.															.												.	.	.	.
Template Sequence		Q	S	R	L	S	R	I	F	N	P	K	T	G	K	T	V	M	L	A	F	D	H	.	.	.	.	.	.	.	.	G	Y	F	Q	G	P	T	T	.	.	.	.	G	L	E	R	I	D	I	N	I	A	P	L	F	E	.	H	A	D	V	L	M	C	T	R	G	I	.	.	.	.	L	R	S	V	V	P	P	A
Template Known Secondary structure									S		T	T	T										T	.	.	.	.	.	.	.	.					S	S		T	.	.	.	.	T		T	T					T	G	G	G	G	G	.	G		S									.	.	.	.					S		G	G
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.									.	.	.	.															.												.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	C	A	M	I	V	A	A	D	E	F	I	P	G	N	G	I	P	V	D	S	V	V	I	D	R	K	I	N	P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V
Query Conservation
Alig confidence																											.	.	.																									.
Template Conservation																											.	.	.																									.
Template Sequence		T	N	R	P	V	V	L	R	A	S	G	A	N	S	I	L	A	E	L	S	N	E	A	V	A	.	.	.	L	S	M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	.	E	H	Q	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T	M	A	V	T	G
Template Known Secondary structure		G											S			T	T	S		T	T						.	.	.	S								T	T		S								T	T	S	T	T	.																			T
Template Predicted Secondary structure																											.	.	.																									.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	S	S	G	V	.	D	E	K	L	F	P	R	A	V	R	V
Query Conservation																																																																						.
Alig confidence					.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.																						.
Template Conservation					.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	R	.	.	.	.	.	.	.	.	D	Q	R	Y	F	S	L	A	T	R	I	A	A	E	M	G	A	Q	I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G	C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q
Template Known Secondary structure					.	.	.	.	.	.	.	.																T		S								T	.	.	.	.	.	.	.	.	.	.	T	T							T		S	S								S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.									.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.											.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	T	A	G	A	S	G	F	L	A	G	R	A	V	W	A	S	V	V	G	L	P	D	N	E	L	M	L	R	D	V	C	A	P	K	L	Q	Q	L	G	D	I	V	D	E	M	M	A
Query Conservation
Alig confidence																				.	.	.	.									.	.
Template Conservation																				.	.	.	.									.	.
Template Sequence		A	I	D	Q	G	A	S	G	V	D	M	G	R	N	I	F	Q	S	.	.	.	.	D	H	P	V	A	M	M	K	.	.	A	V	Q	A	V	V	H	H	N	E	T	A	D	R	A	Y	E
Template Known Secondary structure					T	T							S					T	S	.	.	.	.	S								.	.								S
Template Predicted Secondary structure																				.	.	.	.									.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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