Return to main results Retrieve Phyre Job Id

Job DescriptionP32141
Confidence95.58%DateThu Jan 5 11:49:28 GMT 2012
Rank162Aligned Residues103
% Identity12%Templatec3fluD_
PDB info PDB header:lyaseChain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130 .........140.........150.........160.........170.........180.........
Predicted Secondary structure 




..





















Query SS confidence 


















. .


























































Query Sequence  PLQIKQDGGKALKLLVLWR. . SDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGDSGA
Query Conservation 

 
 







 

   .. 
            
 
 
   
 


 
              
  
  


   



Alig confidence 


















..


















.













.........















Template Conservation     
   

 

   
 


   

  

  
        .     

 

    .........    
  
  
   

Template Sequence  IDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHV. AKRVPVIAGTGANN. . . . . . . . . TVEAIALSQAAEKAGA
Template Known Secondary structure  TT

SSTTTTGGGS
.TTSS



SS.........T
Template Predicted Secondary structure 












.








.........


Template SS confidence 















































































   28.30.........40.........50.........60....... ..70.........80. ........90.......
 
   190.........200.........210.........220....
Predicted Secondary structure 













Query SS confidence 


































Query Sequence  DLYKVEMPLYGKGPQQELLCASQRLNDHINMPWVI
Query Conservation 

 
   

                     

 

Alig confidence 


































Template Conservation 
 
   

     
   
      

     

  
Template Sequence  DYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMII
Template Known Secondary structure  S


SS


T

S
Template Predicted Secondary structure 













Template SS confidence 


































   98.100.........110.........120.........130..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions