Job Description P32141 Confidence 98.18% Date Thu Jan 5 11:49:28 GMT 2012 Rank 32 Aligned Residues 204 % Identity 13% Template c3exsB_ PDB info PDB header:lyase Chain: B: PDB Molecule:rmpd (hexulose-6-phosphate synthase); PDBTitle: crystal structure of kgpdc from streptococcus mutans in2 complex with d-r5p Resolution 2.50 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		F	A	M	L	A	V	D	Q	R	E	A	M	R	M	M	F	A	A	A	G	A	P	A	P	V	A	D	S	V	L	T	D	F	K	V	N	A	A	K	A	L	S	P	Y	A	S	A	I	L	V	.	.	.	.	D	Q	Q	F	C	Y	R	Q	V	V	E	Q	N	A	I	A	K	S	C	A	M	I	V	A	A	D
Query Conservation																																																				.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.										.	.	.	.																										.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																																							.
Template Sequence		N	L	Q	V	A	L	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	L	K	G	A	I	T	A	A	V	S	V	.	G	N	E	V	D	V	I	E	A	G	T	V	C	L	L	Q	V	G	S	E	L	V	E	V	L	R	S	L	F	P	D	K	I	I	V	A	D	T	.
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S												.	G	G	G		S														T											S	S	S							.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																																							.
Template SS confidence
		7	.	.	10	.	.	.	.																				.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	I	P	G	N	G	I	P	V	D	S	V	V	I	D	R	K	I	N	P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	K	C	A	D	A	G	G	T	V	A	K	N	N	A	V	R	G	A	D	W	M	T	C	I	C	S	A	T	.	.	.	.	.	.	.	.	I	P	T	M	K	A	A	R	K	A	I	E	D	I	N	P	D	K	G	E	I	Q	V	E	L	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.				S											T	T	T		S						T	T	S		.	.	.	.	.	.	.	.																T	T	T								.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
													66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	S	S	G	V	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	G	A	S	G	F	L	A
Query Conservation
Alig confidence		.																											.	.	.																				.	.												.	.	.	.
Template Conservation		.																											.	.	.																				.	.												.	.	.	.
Template Sequence		.	Y	G	D	W	T	Y	D	Q	A	Q	Q	W	L	D	A	G	I	S	Q	A	I	Y	H	Q	S	R	.	.	.	T	W	G	E	K	D	L	N	K	V	K	K	L	I	E	M	G	F	R	.	.	V	S	V	T	G	G	L	S	V	D	T	.	.	.	.	L	K	L	F	E	G	V	D	V	F	T	F	I	A
Template Known Secondary structure		.		S	S												T	T											.	.	.																	T			.	.					S	S			T	T	T	.	.	.	.	G	G	G	G	T	T	S			S
Template Predicted Secondary structure		.																											.	.	.																				.	.												.	.	.	.
Template SS confidence
			119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	A	V	W	A	S	V	V	G	L	P	D	N	E	L	M	L	R	D	V	C	A	P	K	L	Q	Q	L	G	D	I	V	D	E	M	M	A
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	G	I	T	E	A	.	.	.	.	.	.	.	.	.	.	.	.	K	N	P	A	G	A	A	R	A	F	K	D	E	I	K	R	I	W	G
Template Known Secondary structure							S	S	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.													.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions