 |
Job Description | P32141 | Confidence | 95.05% | Date | Thu Jan 5 11:49:28 GMT 2012 |
Rank | 171 | Aligned Residues | 93 |
% Identity | 14% | Template | c3ceuA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:thiamine phosphate pyrophosphorylase; |
PDBTitle: crystal structure of thiamine phosphate pyrophosphorylase2 (bt_0647) from bacteroides thetaiotaomicron. northeast3 structural genomics consortium target btr268
|
Resolution | 2.30 Å |
|
 |
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | G | D | S | G | A | D | L | Y | K | V | E | M | P | L | Y | G | K | G | P | Q | Q | E | L | L | C | A | S | Q | R | L | N | D | H | I | N | M | P | W | V | I | L | S | S | G | V | D | E | K | L | F | P | R | A | V | R | V | A | M | T | A | G | A | S | G | F | L | A | G | R | A | V | W | A | S | V | V | G | L |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|
|
|
|   | . | . | . |   |
|
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . |
|   |
|
|
|
|
|   |   |   |
|
| . | . | . | . |   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |
Template Sequence |   |
K | N | R | K | H | F | Y | D | Y | V | F | . |
. |
. |
X | S | P | I | Y | S | T | Y | T | A | E | E | L | R | E | A | Q | K | A | K | I | I | D | S | K | . |
V | X | A | L | G | G | I | N | E | D | N | L | . |
. |
. |
. |
L | E | I | K | D | F | G | F | G | G | A | V | V | L | G | D | L | W | N | K | F | D | A | C |
Template Known Secondary structure |   |
 | T | T | G | G | G | S | S |  |  |  | . | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |
| S | S | T | T | . |  |  |  |  | S | S |
|
| T | T | T |  | . | . | . | . |  |  |  |  |  | T | T |
| S |  |  |  |  | S |  |  |  |  | T | T |
|
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | |
|
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
. | . | 140 | . | . | . | . | . | . | . | . | . | |
|
|
|
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
263 | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | N | E | L | M | L | R | D | V | C | A | P | K | L | Q | Q | L | G | D | I |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
L | D | Q | N | Y | L | A | V | I | E | H | F | K | K | L | K | K | L | A | D | L |
Template Known Secondary structure |   |
T | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|