Job Description P32141 Confidence 81.69% Date Thu Jan 5 11:49:28 GMT 2012 Rank 304 Aligned Residues 147 % Identity 13% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L
Query Conservation
Alig confidence																																								.	.	.							.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																								.	.	.							.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		A	K	T	Q	V	E	K	G	A	E	V	L	D	V	N	F	G	I	E	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S	.	.	.	N	V	P	L	S	L	.	.	.	.	.	.	.	.	.	.	.	D	I	Q	N	V	D	L	T	E	R	A	L	R	A	Y	P	.	.	G	R	S	L
Template Known Secondary structure								T	T		S							S	S	G	G	G	S																T	.	.	.		S					.	.	.	.	.	.	.	.	.	.	.																S	.	.	S
Template Predicted Secondary structure																																								.	.	.							.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.				.	.	.	.	.	.												390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.			.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.																				.
Query SS confidence																																				.	.	.	.																				.
Query Sequence		Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	.	.	.	.	S	S	G	V	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	.	G	A	S	G	F	L	A	G	R	A	V	W	A	S	V	V	G	L	P	D	N	E
Query Conservation																																				.	.	.	.																				.
Alig confidence			.	.	.	.	.	.																												.	.	.	.																				.						.	.
Template Conservation			.	.	.	.	.	.																																																									.	.
Template Sequence		F	.	.	.	.	.	.	N	S	A	K	V	D	E	E	E	L	E	M	K	I	N	L	L	K	K	Y	G	G	T	L	I	V	L	L	M	G	K	D	V	P	K	S	F	E	E	R	K	E	Y	F	E	K	A	L	K	I	L	E	R	H	D	F	.	.	S	D	R	V	I	F	D	P	G	V	L	P	L	G	A
Template Known Secondary structure			.	.	.	.	.	.					S																							S		S	S	S				S																		T	T		.	.	T	T	S										G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.																																																									.	.
Template SS confidence
		410							.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.			.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	L	R	D	V	C	A	P	K	L	Q	Q	L	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	K	P	V	E	V	L	K	T	I	E	F	I	S	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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