Job Description P32141 Confidence 96.96% Date Thu Jan 5 11:49:28 GMT 2012 Rank 103 Aligned Residues 179 % Identity 11% Template c3b4uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 Resolution 1.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.												.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	T	D	F	K	V	N	A	A	K	A	L	S	P	Y	A	S	A	I	L	V	.	.	.	.	.	.	.	.	.	.	.	D	Q	Q	F	C	Y	R	Q	V	V	E	Q	N	A	I	A	K	S	C	A	M	I	V	A	A	D	E	F	I	P	G	N	G	I	P	V	D	S	V	V	I	D	R	K	I	N	P
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.							.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.							.	.	.	.
Template Sequence		D	I	D	A	M	I	A	H	A	R	R	C	L	S	N	G	C	D	S	V	T	L	F	G	T	T	G	E	G	C	S	V	G	S	R	E	R	Q	A	I	L	S	S	F	I	A	A	G	I	A	P	S	R	I	V	T	G	V	L	V	D	S	I	.	.	.	.	.	.	E	D	A	A	D	Q	.	.	.	.	S
Template Known Secondary structure																T	T		S					S	S	T	T	T	T	G	G	G	S		T	T												T	T			G	G	G								S	S		.	.	.	.	.	.							.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.							.	.	.	.	.	90					.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	.	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L
Query Conservation																		.
Alig confidence																		.																															.	.													.															.
Template Conservation																																																	.	.													.															.
Template Sequence		A	E	A	L	N	A	G	A	R	N	I	L	L	A	P	P	S	Y	F	K	N	V	S	D	D	G	L	F	A	W	F	S	A	V	F	S	K	I	G	K	D	A	R	D	I	L	V	.	.	Y	N	I	P	S	V	T	M	V	T	L	S	.	V	E	L	V	G	R	L	K	A	A	F	P	G	I	.	V	T	G
Template Known Secondary structure							T	T		S									S	S		S																			T	T							.	.								S					.												T	T	T	.
Template Predicted Secondary structure																																																	.	.													.															.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	S	S	G	V	D	E	K	L	F	P	R	A	V	R	V	A	M	T	A	G	A	S	G	F	L	A	G
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.														.							.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.														.							.	.	.	.	.	.
Template Sequence		V	K	D	S	S	G	N	.	.	.	.	.	.	.	.	.	W	S	H	T	E	R	L	L	K	E	H	G	D	.	L	A	I	L	I	G	.	.	.	.	.	.	D	E	R	D	L	A	R	G	V	R	L	G	G	Q	G	A	I	S	G
Template Known Secondary structure						S			.	.	.	.	.	.	.	.	.												T	T	.	S						.	.	.	.	.	.											T	T							S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.														.							.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions