Job Description P32141 Confidence 56.58% Date Thu Jan 5 11:49:28 GMT 2012 Rank 408 Aligned Residues 112 % Identity 15% Template c3aamA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8 Resolution 1.58 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																		.																																																		.	.	.	.
Query SS confidence																		.																																																		.	.	.	.
Query Sequence		P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	.	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	.	.	.	.	I	I	D	A	A	K	E	L	G	D
Query Conservation																		.																																																		.	.	.	.
Alig confidence																		.																																																		.	.	.	.
Template Conservation
Template Sequence		V	E	E	A	T	A	L	G	L	T	A	F	Q	I	F	A	K	S	P	R	S	W	R	P	R	A	L	S	P	A	E	V	E	A	F	R	A	L	R	E	A	S	G	G	L	P	A	V	I	H	A	S	Y	L	V	N	L	G	A	E	G	E	L	W	E	K	S	V	A	S	L	A	D	D	L	E	K	A	A	L
Template Known Secondary structure									T		S						S	S		T	T			S																			T	T										T	T			T	T		S	S	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		S	G	A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	.	.	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I
Query Conservation																		.	.
Alig confidence											.							.	.
Template Conservation											.
Template Sequence		L	G	V	E	Y	V	V	V	H	.	P	G	S	G	R	P	E	R	V	K	E	G	A	L	K	A	L	R	L	A	G	V	R	S	R	P	V	L	L	V
Template Known Secondary structure			T								.			B	S																	T			S	S	S
Template Predicted Secondary structure											.
Template SS confidence
		100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions