Job Description P32141 Confidence 80.23% Date Thu Jan 5 11:49:28 GMT 2012 Rank 313 Aligned Residues 167 % Identity 12% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																														.	.	.	.																									.	.	.
Query SS confidence																														.	.	.	.																									.	.	.
Query Sequence		P	V	A	D	S	V	L	T	D	F	K	V	N	A	A	K	A	L	S	P	Y	A	S	A	I	L	V	D	.	.	.	.	Q	Q	F	C	Y	R	Q	V	V	E	Q	N	A	I	A	K	S	C	A	M	I	V	A	A	.	.	.	D	E	F	I	P	G	N	G	I	P	V	D	S	V	V	I	D	R	K	I	N
Query Conservation																														.	.	.	.																									.	.	.
Alig confidence																														.	.	.	.																									.	.	.																	.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		P	V	M	A	D	S	I	D	K	M	V	I	E	T	S	K	A	H	E	L	G	A	D	L	V	E	I	R	L	D	W	L	K	D	F	N	P	L	E	D	L	K	T	I	I	K	K	S	P	L	P	T	L	F	T	Y	R	P	K	W	E	G	G	Q	Y	E	G	D	E	N	E	R	R	D	V	.	.	.	.	.
Template Known Secondary structure						S	S															T		S						G	G	G		S	S															S	S								B	G	G	G	T	S	S	B		S									.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Sequence		L	R	L	A	M	E	L	G	A	D	Y	I	D	V	.	.	.	.	.	.	.	.	.	E	L	Q	V	A	S	E	F	I	K	S	I	D	G	K	K	P	G	K	F	K	V	I	V	S	S	H	N	Y	.	.	.	.	.	Q	N	T	P	S	V	E	D	L	D	G	L	V	A	R	I	Q	Q	T	G	A	D	I
Template Known Secondary structure								T	T		S					.	.	.	.	.	.	.	.	.												T	T	T				S	S										S	.	.	.	.	.	S																		T	T		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.										.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	M	P	W	V	I	L	S	S	G
Query Conservation
Alig confidence								.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		V	K	I	A	T	T	.	.	.	.	A	V	D	I	A	D	V	A	R	M	F	H	I	T	S	K	A	Q	V	P	T	I	G	L	V	M	G
Template Known Secondary structure								.	.	.	.		S	S	G	G	G												S	S								S
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions