Job Description P32141 Confidence 87.32% Date Thu Jan 5 11:49:28 GMT 2012 Rank 269 Aligned Residues 152 % Identity 13% Template c2fptA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, mitochondrial; PDBTitle: dual binding mode of a novel series of dhodh inhibitors Resolution 2.40 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.															.	.	.	.
Query SS confidence																							.	.	.	.	.	.															.	.	.	.
Query Sequence		Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	D	.	.	.	.	.	.	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	.	.	.	.	C	H	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R	E	Q	A	I	I	D	A	A	K	E
Query Conservation																							.	.	.	.	.	.															.	.	.	.
Alig confidence																							.	.	.	.	.	.															.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.
Template Sequence		R	V	L	G	P	L	A	D	Y	L	V	V	N	V	S	S	P	N	T	A	G	L	R	S	L	Q	G	K	A	E	L	R	R	L	L	T	K	V	L	Q	E	R	D	G	L	R	R	V	H	R	P	A	V	L	V	K	I	A	.	.	.	.	.	.	.	.	P	D	L	T	S	Q	D	K	E	D	I	A	S	V
Template Known Secondary structure					G	G	G		S									T	T	S	T	T	S	G	G	G	G	S																	T	S		G	G	G										.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.									.	.	260	.	.	.	.	.	.	.	.	.	270	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		L	G	D	S	G	A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	L	L	C	A	S	Q	R	L	N	D	H	I	N	.	.	M	P	W	V	I	L	S	S	G	V	D	E	K	L	F	P	R	A	V	R	V	A	M	T
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																					.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T	Q	T	I	R	E	M	Y	A	L	T	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	G	Q	D	A	L	E	K	I	R	.	.	.	.
Template Known Secondary structure						T										B	S				T	T				T	T	T	T	S	S	S																						T	T	T		S						S	S			S										.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	S	G	F	L	A	G	R	A	V	W	A	S	V	V	G	L	P	D	N	E	L	M	L	R	D	V	C	A	P	K	L	Q	Q	L	G	D	I	V	D	E	M	M	A	K	R
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	P	V	V	G	K	V	K	R	E	L	E	A	L	L	K	E	Q
Template Known Secondary structure			T		S					S							.	.	.	.	.	.	.	.	.	.	.	.	.	.		T																	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.															.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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