Job Description P32141 Confidence 93.60% Date Thu Jan 5 11:49:28 GMT 2012 Rank 206 Aligned Residues 154 % Identity 12% Template c1tv5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase homolog, mitochondrial; PDBTitle: plasmodium falciparum dihydroorotate dehydrogenase with a bound2 inhibitor Resolution 2.40 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	Q	I	K	Q	D	G	G	K	A	L	K	L	L	V	L	W	R	S	D	E	.	.	.	.	.	.	.	.	D	A	Q	Q	R	L	D	M	V	K	E	F	N	E	L	C	H	.	.	.	.	.	.	.	.	.	.	S	H	G	L	V	S	I	I	E	P	V	V	R	P	P	R	R	G	D	K	F	D	R
Query Conservation																								.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.
Template Sequence		K	Y	C	I	N	K	I	G	R	Y	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	.	.	.	.	.	.	.	.	P	D	L	N
Template Known Secondary structure									G	G	G		S									T	T	S	T	T	G	G	G	G	G	S																								S	S	S	S	S										.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.									.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		E	Q	A	I	I	D	A	A	K	E	L	G	D	S	G	A	D	L	Y	K	V	E	M	P	L	Y	G	K	G	P	Q	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	C	A	S	Q	R	L	N	D	H	I	N	.	.	M	P	W	V	I	L	S	S	G	V	D	E	K	L	F	P
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G	I	F	S	G	L	D	A	L
Template Known Secondary structure															T	T		S								B	S						G	G	G	T	T			S																						T	T	T		S						S	S			S
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	R	V	A	M	T	A	G	A	S	G	F	L	A	G	R	A	V	W	A	S	V	V	G	L	P	D	N	E	L	M	L	R	D	V	C	A	P	K	L	Q	Q	L	G	D	I	V	D	E	M	M	A	K	R
Query Conservation
Alig confidence						.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	I	E	.	.	.	.	A	G	A	S	V	C	Q	L	Y	S	C	L	V	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	K	S	A	V	Q	I	K	R	E	L	N	H	L	L	Y	Q	R
Template Known Secondary structure						.	.	.	.	T	T							S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure						.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		516	.	.	.					520	.	.	.	.	.	.	.	.	.	530	.	.	.	.															.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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