 |
Job Description | P09835 | Confidence | 99.63% | Date | Thu Jan 5 11:02:31 GMT 2012 |
Rank | 22 | Aligned Residues | 121 |
% Identity | 21% | Template | c3zxqA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:hypoxia sensor histidine kinase response regulator dost; |
PDBTitle: crystal structure of the atp-binding domain of mycobacterium2 tuberculosis dost
|
Resolution | 1.90 Å |
|
 |
  |   |
373 | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | L | E | Q | A | I | R | S | L | M | R | E | M | E | L | E | G | R | G | I | V | S | H | L | E | W | R | I | D | E | S | A | L | S | E | N | Q | R | V | T | L | F | R | V | C | Q | E | G | L | N | N | I | V | K | H | A | D | A | S | A | V | T | L | Q | G | W | Q | Q | D | E | R | L | M | L | V | I | E | D | D |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|   |
|
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   | . |   |   |   |   |
|   |
|   |
Template Sequence |   |
T | G | L | R | H | R | L | D | K | V | I | D | Q | L | A | I | P | . |
. |
A | L | H | T | T | V | Q | Y | T | G | P | L | S | V | V | D | T | V | L | A | N | H | A | E | A | V | L | R | E | A | V | S | N | A | V | R | H | A | N | A | T | S | L | A | I | N | V | S | V | E | D | D | . |
V | R | V | E | V | V | D | D |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | . | . | T | S |  |  |  |  |  |  |  | S |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |
|
|  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  | . |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
451 | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | |
|
. | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | |
520 | . | . | . | . | . | . | . |
  |
  |   |
453 | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | |
|
. | . | 490 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | G | L | P | P | G | S | G | Q | Q | G | F | G | L | T | G | M | R | E | R | V | T | A | L | G | G | T | L | H | I | S | C | L | H | . |
. |
G | T | R | V | S | V | S | L | P | Q | R |
Query Conservation |   |
|   |
|
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |
|   |   | . | . |
|
|   |
|   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   | . | . |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |
|
|   |
|   |
|   |
|
|
|
|
Template Sequence |   |
G | V | G | I | S | G | . |
. |
D | I | T | E | S | G | L | R | N | L | R | Q | R | A | D | D | A | G | G | E | F | T | V | E | N | M | P | T | G | G | T | L | L | R | W | S | A | P | L | R |
Template Known Secondary structure |   |
|
| S | S |
| G | . | . | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
528 | . | 530 | . | . | . | |
|
. | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|