Return to main results Retrieve Phyre Job Id

Job DescriptionP09835
Confidence99.76%DateThu Jan 5 11:02:31 GMT 2012
Rank13Aligned Residues131
% Identity15%Templatec3a0tA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sensor protein; PDBTitle: catalytic domain of histidine kinase thka (tm1359) in2 complex with adp and mg ion (trigonal)
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   369370.........380.........390.........400. ........410.........420.........430 .........440......
Predicted Secondary structure 











.







.



Query SS confidence 
































.




























.















Query Sequence  QLDDLTLEQAIRSLMREMELEGRGIVSHLEWRI. DESALSENQRVTLFRVCQEGLNNIVKHAD. ASAVTLQGWQQDERLM
Query Conservation        
   
               
 
    .            
  

 


 



   . 
 
 
        
 
Alig confidence 
































.




























.















Template Conservation       

  

               
 
          
  
   
  

 


 



       
 
          
Template Sequence  EFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVR
Template Known Secondary structure 

TT
S
S



TT

SS
Template Predicted Secondary structure 
























Template SS confidence 















































































   605....610.........620.........630.........640.........650.........660.........670.........680....
 
   447..450.........460. ........470..... ....480..... ....490.........
Predicted Secondary structure 









.............




.



.


Query SS confidence 














. . . . . . . . . . . . .













.









.













Query Sequence  LVIEDDGSGLPPGSG. . . . . . . . . . . . . QQGFGLTGMRERVT. ALGGTLHISC. LHGTRVSVSLPQRY
Query Conservation 
 
 
 
 

     .............
 



      
 .  

 
 
 
.  

 
 
 

   
Alig confidence 














.............













.









.













Template Conservation    
 
 
 

       

  
      
 



 
 
 

    

         

 
 
 

   
Template Sequence  VSVWNSGPPIPEELKEKIFSPFFTTKTQGTGLGLSICRKIIEDEHGGKIWTENRENGVVFIFEIPKTP
Template Known Secondary structure  S



GGGTTGGGSTT

SSTT

S
TTTS
TTSS
Template Predicted Secondary structure 



































Template SS confidence 



































































   685....690.........700.........710.........720.........730.........740.........750..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions