Job Description P09835 Confidence 99.85% Date Thu Jan 5 11:02:31 GMT 2012 Rank 10 Aligned Residues 200 % Identity 15% Template c3a0rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360) Resolution 3.80 Å

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		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		L	E	T	E	E	S	V	R	R	D	V	A	R	E	L	H	D	D	I	G	Q	T	I	T	A	I	R	T	Q	A	G	I	V	Q	R	L	A	A	D	N	A	S	V	K	Q	S	G	Q	L	I	E	Q	L	S	L	G	V	Y	D	A	V	R	R	L	L	G	R	L	R	.	.	P	R	Q	L	D	D	L	T	L
Query Conservation																																																																							.	.
Alig confidence																																																																							.	.
Template Conservation
Template Sequence		R	R	E	R	L	S	I	L	G	E	M	T	A	R	V	A	H	E	I	R	N	P	I	T	I	I	G	G	F	I	M	R	M	K	K	H	L	D	D	P	E	T	L	K	K	Y	I	N	I	I	T	N	E	L	S	R	L	E	T	I	V	K	E	I	L	E	Y	S	K	E	R	V	L	E	F	T	E	F	N	L
Template Known Secondary structure																																			T	T	S		S		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																												.																														.
Query SS confidence																												.																														.
Query Sequence		E	Q	A	I	R	S	L	M	R	E	M	E	L	E	G	R	G	I	V	S	H	L	E	W	R	I	.	D	E	S	A	L	S	E	N	Q	R	V	T	L	F	R	V	C	Q	E	G	L	N	N	I	V	K	H	A	D	.	A	S	A	V	T	L	Q	G	W	Q	Q	D	E	R	L	M	L	V	I	E	D	D	G
Query Conservation																												.																														.
Alig confidence																												.																														.
Template Conservation
Template Sequence		N	E	L	I	R	E	V	Y	V	L	F	E	E	K	I	R	K	M	N	I	D	F	C	F	E	T	D	N	E	D	L	R	V	E	A	D	R	T	R	I	K	Q	V	L	I	N	L	V	Q	N	A	I	E	A	T	G	E	N	G	K	I	K	I	T	S	E	D	M	Y	T	K	V	R	V	S	V	W	N	S	G
Template Known Secondary structure																	T	T	T	T								S		S																				T					T	T		T	T											T	T										S
Template Predicted Secondary structure
Template SS confidence
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
		454	.	.	.	.	.	460	.								.	.	.	.	.	.	.	.	470	.	.	.	.	.		.	.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.															.													.
Query SS confidence										.	.	.	.	.	.	.															.													.
Query Sequence		S	G	L	P	P	G	S	G	.	.	.	.	.	.	.	Q	Q	G	F	G	L	T	G	M	R	E	R	V	T	.	A	L	G	G	T	L	H	I	S	C	L	H	.	G	T	R	V	S	V	S	L	P	Q
Query Conservation										.	.	.	.	.	.	.															.													.
Alig confidence										.	.	.	.	.	.	.															.													.
Template Conservation
Template Sequence		P	P	I	P	E	E	L	K	E	K	I	F	S	P	F	F	T	T	L	G	L	S	I	C	R	K	I	I	E	D	E	H	G	G	K	I	W	T	E	N	R	E	N	G	V	V	F	I	F	E	I	P	K
Template Known Secondary structure						G	G	G	G	T	T	T	S	S	S								T									T	T		S	B							S	S										S
Template Predicted Secondary structure
Template SS confidence
		692	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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