Job Description P09835 Confidence 99.92% Date Thu Jan 5 11:02:31 GMT 2012 Rank 5 Aligned Residues 199 % Identity 14% Template c2q8fA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1 Resolution 2.03 Å

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		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.						.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.																																			.	.
Query SS confidence																																	.	.	.	.	.																																			.	.
Query Sequence		E	S	V	R	R	D	V	A	R	E	L	H	D	D	I	G	Q	T	I	T	A	I	R	T	Q	A	G	I	V	Q	R	.	.	.	.	.	L	A	A	D	N	A	S	V	K	Q	S	G	Q	L	I	E	Q	L	S	L	G	V	Y	D	A	V	R	R	L	L	G	R	L	R	.	.	P	R	Q	L	D	D	L	T
Query Conservation																																	.	.	.	.	.																																			.	.
Alig confidence																																	.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		A	K	A	I	Y	D	F	T	D	T	V	I	R	I	R	N	R	H	N	D	V	I	P	T	M	A	Q	G	V	I	E	Y	K	E	S	F	D	P	V	T	S	Q	N	V	Q	Y	F	L	D	R	F	Y	M	S	R	I	S	I	R	M	L	L	N	Q	H	S	L	L	F	G	H	I	G	S	I	N	P	N	C	N
Template Known Secondary structure																			T	T	T																																																				B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		375	.	.	.	.	380	.	.	.	.	.	.	.										.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.									.	430	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Query Sequence		L	E	Q	A	I	R	S	L	M	R	E	M	E	.	.	.	.	.	.	.	.	.	L	E	G	R	G	I	V	S	H	L	E	W	R	I	D	E	S	A	L	S	E	N	Q	R	V	T	L	F	R	V	C	Q	E	G	L	N	N	I	V	K	H	.	.	.	.	.	.	.	.	A	D	A	S	A	V	T	L	Q
Query Conservation															.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	E	V	I	K	D	G	Y	E	N	A	R	R	L	C	D	L	Y	Y	I	N	S	P	E	L	E	L	E	E	L	N	A	K	S	P	G	Q	P	I	Q	V	V	Y	V	P	S	H	L	Y	H	M	V	F	E	L	F	K	N	A	M	R	A	T	M	E	H	H	A	N	R	G	V	Y	P	P	I	Q	V	H
Template Known Secondary structure																						S												S	S	S	T	T	S																														S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.																										.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.			.	.	490
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		G	W	Q	Q	D	E	R	L	M	L	V	I	E	D	D	G	S	G	L	P	P	G	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	G	F	G	L	T	G	M	R	E	R	V	T	A	L	G	G	T	L	H	I	S	C	L	H	.	.	G	T	R
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		V	T	L	G	N	E	D	L	T	V	K	M	S	D	R	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	T	A	P	R	P	R	V	E	T	S	R	A	V	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	Q	Y	F	Q	G	D	L	K	L	Y	S	L	E	G	Y	G	T	D
Template Known Secondary structure						S	S										S									G	G	G	G		T	T	T	T							S	S			S				S	S		T	T													T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		491	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	V	S	L	P	Q	R	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	I	Y	I	K	A	L	S	T
Template Known Secondary structure								S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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