Job Description P09835 Confidence 98.85% Date Thu Jan 5 11:02:31 GMT 2012 Rank 31 Aligned Residues 87 % Identity 21% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.					.	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.																			460	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	V	T	L	F	R	V	C	Q	E	G	L	N	N	I	V	K	H	A	D	A	S	.	.	.	.	A	V	T	L	Q	G	W	Q	Q	D	.	E	R	L	M	L	V	I	E	D	D	G	S	G	L	P	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	Q	Q	G	F	G
Query Conservation																									.	.	.	.											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.											.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	R	S	L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	F	H	A	L	K	S	R	G	Q	Q	G	I	G
Template Known Secondary structure																						T	T	T	S		S											T	T	T										S					G	G	G						S													S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.				.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure																.						.	.	.
Query SS confidence																.						.	.	.
Query Sequence		L	T	G	M	R	E	R	V	T	A	L	G	G	T	.	L	H	I	S	C	.	.	.	L	H	G	T	R	V	S	V	S	L	P
Query Conservation																.						.	.	.
Alig confidence																.						.	.	.
Template Conservation
Template Sequence		I	S	A	A	V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M
Template Known Secondary structure													T											S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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