Job Description P09835 Confidence 99.90% Date Thu Jan 5 11:02:31 GMT 2012 Rank 7 Aligned Residues 195 % Identity 13% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.								.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																.	.	.	.	.	.	.																																							.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.																																							.	.	.	.	.
Query Sequence		S	V	R	R	D	V	A	R	E	L	H	D	D	I	G	Q	T	I	T	A	I	R	T	Q	A	G	I	V	Q	R	.	.	.	.	.	.	.	L	A	A	D	N	A	S	V	K	Q	S	G	Q	L	I	E	Q	L	S	L	G	V	Y	D	A	V	R	R	L	L	G	R	L	R	P	R	Q	L	.	.	.	.	.
Query Conservation																																.	.	.	.	.	.	.																																							.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.																																							.	.	.	.	.
Template Conservation
Template Sequence		R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L	I	N	Q	H	T	L	I	F	D	G	S	T	N	P	A	H	P	K
Template Known Secondary structure		T	T	T														T	T	T																																																			T	S	S	S		S	S		S		S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
								371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.										.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	D	D	L	T	L	E	Q	A	I	R	S	L	M	R	E	M	E	L	E	G	R	.	.	.	.	.	.	.	.	.	G	I	V	S	H	L	E	W	R	I	D	E	S	A	L	S	E	N	Q	R	V	T	L	F	R	V	C	Q	E	G	L	N	N	I	V	K	H	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M	L	F	E	L	F	K	N	A	M	R	A	T	V	E	S	H	E	S
Template Known Secondary structure			B	T	T	B																										S												S	S	S	T	T	S																													T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
			429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.														460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.			.	.	490	.	.
Predicted Secondary structure		.																																.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence		.																																.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		.	A	D	A	S	A	V	T	L	Q	G	W	Q	Q	D	E	R	L	M	L	V	I	E	D	D	G	S	G	L	P	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	Q	Q	G	F	G	L	T	G	M	R	E	R	V	T	A	L	G	G	T	L	H	I	S	C	L	H	.	.	G	T	R	V	S
Query Conservation		.																																.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence		.																																.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	D	L	S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	S	T	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y	F	Q	G	D	L	Q	L	F	S	M	E	G	F	G	T	D	A	V
Template Known Secondary structure			S													S	S																			G	G	G	G		T	T	T	T						S	S													T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		493	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	L	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	L	K	A
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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