Job Description P09835 Confidence 99.92% Date Thu Jan 5 11:02:31 GMT 2012 Rank 4 Aligned Residues 243 % Identity 16% Template c1gjvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck)2 complxed with atp-gamma-s Resolution 2.7 Å

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		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		L	L	L	S	L	L	V	Q	S	L	T	G	L	L	L	G	A	G	I	Q	R	L	R	E	L	N	Q	S	L	Q	K	E	L	A	R	N	Q	H	L	A	E	R	L	L	E	T	E	E	S	V	R	R	D	V	A	R	E	L	H	D	D	I	G	Q	T	I	T	A	I	R	T	Q	A	G	I	V	.	.	.	Q
Query Conservation																																																																														.	.	.
Alig confidence																																																																														.	.	.
Template Conservation
Template Sequence		L	P	V	R	I	A	H	R	I	K	G	F	R	S	L	P	F	I	I	G	C	N	P	T	I	L	H	V	H	E	L	Y	I	R	A	F	Q	K	L	T	D	F	P	P	I	K	D	Q	A	D	E	A	Q	Y	C	Q	L	V	R	Q	L	L	D	D	H	K	D	V	V	T	L	L	A	E	G	L	R	E	S	R
Template Known Secondary structure																S						T	S																			T	S					S																		T	T	T													T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.							370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.				.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																								.	.	.	.	.	.																									.	.	.
Query SS confidence																																								.	.	.	.	.	.																									.	.	.
Query Sequence		R	L	A	A	D	N	A	S	V	K	Q	S	G	Q	L	I	E	Q	L	S	L	G	V	Y	D	A	V	R	R	L	L	G	R	L	R	P	R	Q	.	.	.	.	.	.	L	D	D	L	T	L	E	Q	A	I	R	S	L	M	R	E	M	E	L	E	G	R	G	I	.	.	.	V	S	H	L	E	W	R	I	D
Query Conservation																																								.	.	.	.	.	.																									.	.	.
Alig confidence																																								.	.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		K	H	I	E	D	E	K	L	V	R	Y	F	L	D	K	T	L	T	S	R	L	G	I	R	M	L	A	T	H	H	L	A	L	H	E	D	K	P	D	F	V	G	I	I	C	T	R	L	S	P	K	K	I	I	E	K	W	V	D	F	A	R	R	L	C	E	H	K	Y	G	N	A	P	R	V	R	I	N	G	H
Template Known Secondary structure		T	T	S	S																													T	T	S			T	T			T	T																											S										S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.										.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.												460	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	A	L	S	E	N	Q	R	V	T	L	F	R	V	C	Q	E	G	L	N	N	I	V	K	H	.	.	.	.	.	.	.	.	.	A	D	A	S	A	V	T	L	Q	G	W	Q	Q	D	E	R	L	M	L	V	I	E	D	D	G	S	G	L	P	P	G	.	.	.	.	.	.	.	.	.	.	.	S	G	Q
Query Conservation																												.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	A	R	F	P	F	I	P	M	P	L	D	Y	I	L	P	E	L	L	K	N	A	M	R	A	T	M	E	S	H	L	D	T	P	Y	N	V	P	D	V	V	I	T	I	A	N	N	D	V	D	L	I	I	R	I	S	D	R	G	G	G	I	A	H	K	D	L	D	R	V	M	D	Y	H	F	T	T	A	G
Template Known Secondary structure		T	T																												T		T	T		T	T	S												S	S										S					G	G	G	T	T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.			.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		Q	G	F	G	L	T	G	M	R	E	R	V	T	A	L	G	G	T	L	H	I	S	C	L	H	.	.	G	T	R	V	S	V	S	L	P	Q
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		F	G	F	G	L	P	T	S	R	A	Y	A	E	Y	L	G	G	S	L	Q	L	Q	S	L	Q	G	I	G	T	D	V	Y	L	R	L	R	H
Template Known Secondary structure			S														T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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