Return to main results Retrieve Phyre Job Id

Job DescriptionP41409
Confidence52.67%DateThu Jan 5 12:01:30 GMT 2012
Rank13Aligned Residues55
% Identity16%Templatec2dplA_
PDB info PDB header:ligaseChain: A: PDB Molecule:gmp synthase [glutamine-hydrolyzing] subunit b; PDBTitle: crystal structure of the gmp synthase from pyrococcus horikoshii ot3
Resolution1.43 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.......
Predicted Secondary structure 















Query SS confidence 






















































Query Sequence  LPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLN
Query Conservation   






 
 

  

   
  
 
 
 


   

        

  

   
Alig confidence 






















































Template Conservation   




 





 


 
   
 
  
  
 
  
     
       

  

Template Sequence  SKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFG
Template Known Secondary structure  S


SSGGG
S


TTTTTT
Template Predicted Secondary structure 
















Template SS confidence 






















































   21........30.........40.........50.........60.........70.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions