Return to main results Retrieve Phyre Job Id

Job DescriptionP23849
Confidence84.84%DateThu Jan 5 11:39:57 GMT 2012
Rank6Aligned Residues90
% Identity16%Templatec1xl6B_
PDB info PDB header:metal transportChain: B: PDB Molecule:inward rectifier potassium channel; PDBTitle: intermediate gating structure 2 of the inwardly rectifying k+ channel2 kirbac3.1
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90....... ..100.........110.........120.........130.........140
Predicted Secondary structure 






.....










Query SS confidence 































. . . . .










































Query Sequence  QLRTRDGFIIIVMFWILFSVISAFPLWIDSEL. . . . . NLTFIDALFEGVSGITTTGATVIDDVSSLPRAYLYYRSQLNFI
Query Conservation   
            


    



       .....  
  

 




  






              
  
  
Alig confidence 































.....


















...




















Template Conservation     
   
             

                       

  
  


...


  
               
Template Sequence  TVSWPVFITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIG. . . YGKLIPIGPLANTLVTLEALC
Template Known Secondary structure  TS
TT
S
STTS
TT
TS

...
STT


TT
Template Predicted Secondary structure 












...







Template SS confidence 















































































   43......50.........60.........70.........80.........90........ .100.........110.........
 
   141........150........
Predicted Secondary structure 

Query SS confidence 

















Query Sequence  GGLGVIVLAVAVLPLLGI
Query Conservation 





    


     
Alig confidence 

















Template Conservation 
          
      
Template Sequence  GMLGLAVAASLIYARFTR
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 

















   120.........130.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions