Job Description P32703 Confidence 19.77% Date Thu Jan 5 11:50:22 GMT 2012 Rank 16 Aligned Residues 214 % Identity 19% Template d2nwwa1 SCOP info Proton glutamate symport protein Proton glutamate symport protein Proton glutamate symport protein Resolution 3.20

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.													.	.	.										.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.													.	.	.										.	.	.	.
Query Sequence		I	P	L	P	L	M	Q	I	A	I	G	A	L	L	A	W	P	T	F	G	L	H	.	.	.	.	.	.	.	.	V	E	F	D	P	E	L	F	L	V	L	F	.	.	.	I	P	P	L	L	F	A	D	G	.	.	.	.	W	K	T	P	T	R	E	F	L	E	H	G	R	E	I	F	G	L	A	L	A	L
Query Conservation																								.	.	.	.	.	.	.	.													.	.	.										.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.													.	.	.										.	.	.	.
Template Conservation
Template Sequence		L	Q	K	I	L	I	G	L	I	L	G	A	I	V	G	L	I	L	G	H	Y	G	Y	A	H	A	V	H	T	Y	V	K	P	F	G	D	L	F	V	R	L	L	K	M	L	V	M	P	I	V	F	A	S	L	V	V	G	A	A	S	I	S	P	A	R	L	G	R	V	G	V	K	I	V	V	Y	Y	L	L	T
Template Known Secondary structure			S																		T	T	T	T					T	T	T	T																									T	T	T		S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	T	V	V	G	I	G	F	L	I	Y	W	V	V	P	G	I	P	L	I	P	A	F	A	L	A	A	V	L	S	P	T	D	A	V	A	L	S	G	I	V	G	E	G	R	I	P	K	K	I	M	G	I	L	Q	G	E	A	L	M	N	D	A	S	G	L	V	S	L	K	F	A	V	A	V	A	M	G
Query Conservation
Alig confidence																										.																						.
Template Conservation																										.																						.
Template Sequence		S	A	F	A	V	T	L	G	I	I	M	A	R	L	F	N	P	G	A	G	I	H	L	A	.	V	G	G	Q	Q	F	Q	P	H	Q	A	P	P	L	V	H	I	L	L	D	I	.	V	P	T	N	P	F	G	A	L	A	N	G	Q	V	L	P	T	I	F	F	A	I	I	L	G	I	A	I	T	Y	L	M	N
Template Known Secondary structure																S		S								.																			G	G	G	.	S		S								S																					T	T
Template Predicted Secondary structure																										.																						.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	I	F	T	V	G	G	A	T	V	E	F	M	K	V	A	I	G	G	I	L	A	G	F	V	V	S	W	L	Y	G	R	S	L	R	F	L	S	R	W	G	G	D	E	P	A	T	Q	I	V	L	L	F	L	L	P	F	A	S	Y	L	I	A	E	H	I	G	V	S	G	I	L	A	A	V	A	A	G	M
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	N	E	K	V	R	K	S	A	E	T	L	L	D	A	I	.	.	.	.	.	.	.	.	.	.	.	N	G	L	A	E	A	M	Y	K	I	V	N	G	V	M	Q	Y	A	P	I	G	V	F	A	L	I	A	Y	V	M	A	E	Q	G	V	H	V	V	G	E	L	A	K	V	T	A	A	V	Y	V	G	L
Template Known Secondary structure			S		T	T													.	.	.	.	.	.	.	.	.	.	.															T	T	S																T	G	G	G			T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.												.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		253	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		240	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions