Job Description P32703 Confidence 6.73% Date Thu Jan 5 11:50:22 GMT 2012 Rank 63 Aligned Residues 141 % Identity 7% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		F	L	E	H	G	R	E	I	F	G	L	A	L	A	L	V	V	V	T	V	V	G	I	G	F	L	I	Y	W	V	V	P	G	I	P	L	I	P	A	F	A	L	A	A	V	L	S	P	T	D	A	V	A	L	S	G	I	V	G	.	.	.	.	E	G	R	I	P	K	K	I	M	G	I	L	Q	G	E	A	L
Query Conservation																																																													.	.	.	.
Alig confidence																																																													.	.	.	.
Template Conservation
Template Sequence		Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R
Template Known Secondary structure		T		S	S	S					G	G	G																T	T			B																														T	T	S	S				T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		892	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	D	A	S	G	L	V	S	L	K	F	A	V	A	V	A	M	G	T	M	I	F	T	V	G	G	A	T	V	E	F	M	K	V	A	I	G	G	I	L	A	G	F	V	V	S	W	L	Y	G	R	S	L	R	F	L	S	R	W	G	G	D	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	P	I	L	M	T	S	L	A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T	V	L	A	I	F	F	V	P	V	F	F	V	V	V	R	R	R	F	S	R	K
Template Known Secondary structure																					T	T		S	S	S																				T	T	T	T	S	S	S	S	S	S								T	S
Template Predicted Secondary structure
Template SS confidence
		972	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions