Job Description P32703 Confidence 7.89% Date Thu Jan 5 11:50:22 GMT 2012 Rank 47 Aligned Residues 100 % Identity 16% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.
Query Sequence		M	E	I	F	F	T	I	L	I	M	T	L	V	V	S	L	S	G	V	V	T	R	V	M	P	F	Q	I	P	L	P	L	M	Q	I	A	I	G	A	L	L	A	W	P	T	F	G	L	H	V	E	F	D	P	E	L	.	.	.	.	.	.	.	.	F	L	V	L	F	I	P	P	L	L	F	A	D	G	W	K
Query Conservation																																																										.	.	.	.	.	.	.	.
Alig confidence																								.	.																																	.	.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		M	E	F	A	F	Y	I	C	G	L	I	A	I	L	A	T	L	R	V	I	T	H	.	.	T	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G
Template Known Secondary structure																								.	.		S																						T	T											T																			S	S
Template Predicted Secondary structure																								.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	T	R	E	F	L	E	H	G	R	E	I	F	G	L	A	L	A	L	V	V	V	T	V	V	G	I	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V
Template Known Secondary structure		T	T						T	T		S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions