Return to main results Retrieve Phyre Job Id

Job DescriptionP32703
Confidence25.17%DateThu Jan 5 11:50:22 GMT 2012
Rank10Aligned Residues125
% Identity11%Templatec3ojaA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   421........430.........440.........450.........460.........470.........480.........490.........500
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  QHIEVADHSQQLKEERIARAATAEVAIVAIQKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENL
Query Conservation    
                     
    
  
                                               
Alig confidence 














































..






























Template Conservation      
                               
          ..       
                       
Template Sequence  AKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQS. . PLQLLRAIVKRYEEMYVEQQSVQNNAIRDWD
Template Known Secondary structure  TTSS




SS


..
Template Predicted Secondary structure  ..
Template SS confidence 















































































   383......390.........400.........410.........420......... 430.........440.........450.........460
 
   501........510.........520.........530.........540.......
Predicted Secondary structure 




Query SS confidence 














































Query Sequence  ERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEE
Query Conservation     

   
 


  
   
  
 

 
    
   

 

  
   
Alig confidence 














































Template Conservation          
      
     
             

      
  
Template Sequence  MYQHKETQLAEENARLKKLNGEADLALASANATLQELVVREQNLASQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 














































   461........470.........480.........490.........500.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions