Job Description P32703 Confidence 6.79% Date Thu Jan 5 11:50:22 GMT 2012 Rank 61 Aligned Residues 187 % Identity 13% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.
Predicted Secondary structure																																																													.	.																		.
Query SS confidence																																																													.	.																		.
Query Sequence		F	L	V	L	F	I	P	P	L	L	F	A	D	G	W	K	T	P	T	R	E	F	L	E	H	G	R	E	I	F	G	L	A	L	A	L	V	V	V	T	V	V	G	I	G	F	L	I	Y	W	V	V	P	G	I	P	L	I	P	.	.	A	F	A	L	A	A	V	L	S	P	T	D	A	V	A	L	S	.	G
Query Conservation																																																													.	.																		.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																																		.	.																		.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	T	T	T	T	T																T			S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.													.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.																				.
Query SS confidence																																																		.	.	.																				.
Query Sequence		I	V	G	E	G	R	I	P	K	K	I	M	G	I	L	Q	G	E	A	L	M	N	D	A	S	G	L	V	S	L	K	F	A	V	A	V	A	M	G	T	M	I	F	T	V	G	G	A	.	.	.	T	V	E	F	M	K	V	A	I	G	G	I	L	A	G	F	V	V	S	.	W	L	Y	G	R	S	L	R	F
Query Conservation																																																		.	.	.																				.
Alig confidence																																																		.	.	.																				.
Template Conservation
Template Sequence		V	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L	T	P	A	L	C	A	T
Template Known Secondary structure									T				S							T																T	T	T	S	T	T	T	T				G	G	G																						T	T	T
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	R	W	G	G	D	E	P	A	T	Q	I	V	L	L	F	L	L	P	F	A	S	Y	L	I	A	E	H	I	G	V	S	G	I	L	A	A	V	A	A	G	M	T	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	K	F	G	W	F	N	R	M	F	E	K	S	T	H	H	Y	T	D	S	V	G	G	I	L	R	S	T	G	R	Y	L	V	L	Y	L	I	I	V	V	G	M	A	Y	L
Template Known Secondary structure		S															T
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions