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Job DescriptionP08201
Confidence99.29%DateThu Jan 5 11:00:55 GMT 2012
Rank169Aligned Residues242
% Identity12%Templated2bs2a2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution1.78

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MSKV. . RLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  MKVQYCDSLVIGGGLAGLRAAVATQQKG. . . . LSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKG
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S

STTT....


SS
GGGSGGGG

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SGGGTT

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   4950.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  . . . LSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGSDTQD
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Template Sequence  SDWGCDQKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIIN. . . . . . . . AQKTTITEEDFRHGLIHSRDFGGTKKWR
Template Known Secondary structure  TTT
S
TT



B

S


S........S



GGGTTSB

B

TT
SS

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   77..80.........90.........100.........110.........120 .........130.........140........
 
   126...130.........140.........150.........160.........170.........180.........190.........200.....
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Query Sequence  CFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVH
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Template Sequence  TCYTADATGH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TMLFAVANECLKLGVSIQ
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STT
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   206...210.........220.........230 .........240......... 250.........260....
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Query Sequence  TSKNTLEIVQEGVEARKTMRFADGS. . . . . ELEVDFIVFSTGIRPRDKL. . . . . . . . . . . . . . . . ATQCGLDVAPRGGIV
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Template Sequence  DRKEAIALIHQ. DGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIALETGIAQLGNMGGIR
Template Known Secondary structure 
S.TTTTT


S




GGGSSS
SS
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   177..180....... ..190.........200.........210.........220.........230.........240.........250.....
 
   265....270.........280.... .....290.........300.......
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Query Sequence  INDSCQTSDPDIYAIGECAS. . . . . WNNRVFGLVAPGYKMAQVAVDHI
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Template Sequence  TDYRGEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYF
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TTSB
SSBT
GGG

SSTT


TT
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   377..380.........390.........400.........410.........420....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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