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Job DescriptionP08201
Confidence99.33%DateThu Jan 5 11:00:55 GMT 2012
Rank164Aligned Residues222
% Identity23%Templated1kf6a2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40........ .50....
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Query Sequence  KVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVH. . . . . . . . . . . . . . . . . . . . . . . . . . . . LSSYFS
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Template Sequence  QADLAIVGAGGAGLRAAIAAAQANPN. . AKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDV
Template Known Secondary structure 
S

S
TT..

SS
GGGSGGGG

S



STT

TTT
S
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   4.....10.........20......... 30.........40.........50.........60.........70.........80.
 
   55....60.........70.........80.........90.........100.........110.........120.........130....
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Query Sequence  HHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGSDTQDCFVYRTIED
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Template Sequence  VDYFVHHCPTEMTQLELWGCPWSRR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . PDGSVNVRRFGGMKIERTWFAADKTG
Template Known Secondary structure  TT



B
.............................TTSSB

B

TT
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STT
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   82.......90.........100...... ...110.........120.........130..
 
   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  LNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIV
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Template Sequence  FHMLHTL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FQTSLQFPQIQRFDEHFVLDIL
Template Known Secondary structure  ...................................................TT
TTT
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   133...... 140.........150.........160.
 
   215....220.........230 .........240.. .......250.........260.........270....
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Query Sequence  QEGVEARKTMRFADGS. . . . . ELEVDFIVFSTG. . . . . . . . . . . . . . . IRPRDKLATQCGLDVAPRGGIVINDSCQTSDP
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Template Sequence  VD. DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMGGIETDQNCETRIK
Template Known Secondary structure  .TTTTTT
S





GGGSSS
SS
TT
S
TTT






TTSB
SSB
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   162. ......170.........180.........190.........200.........210.........220.........230.........240
 
   275....280.... .....290.........300.......
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Query Sequence  DIYAIGECAS. . . . . WNNRVFGLVAPGYKMAQVAVDHI
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Template Sequence  GLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQA
Template Known Secondary structure  T
GGG
SSSTTS

TT
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   373......380.........390.........400.........410
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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