Job Description P08201 Confidence 99.93% Date Thu Jan 5 11:00:55 GMT 2012 Rank 92 Aligned Residues 293 % Identity 19% Template c3lzxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin--nadp reductase 2; PDBTitle: crystal structure of ferredoxin-nadp+ oxidoreductase from bacillus2 subtilis (form ii) Resolution 1.90 Å

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		1	.	.	.					.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																																									.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																																									.	.	.	.	.	.	.	.
Query Sequence		M	S	K	V	.	.	.	.	R	L	A	I	I	G	N	G	M	V	G	H	R	F	I	E	D	L	L	D	K	S	D	A	A	N	F	D	I	T	V	F	C	E	E	P	R	I	A	Y	.	.	.	.	.	.	.	.	D	R	V	H	L	S	S	Y	F	S	H	H	T	A	E	E	L	S	L	V	R	E	G	F
Query Conservation						.	.	.	.																																									.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																							.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		M	R	E	D	T	K	V	Y	D	I	T	I	I	G	G	G	P	V	G	L	F	T	A	F	Y	G	G	M	R	Q	.	.	.	.	A	S	V	K	I	I	E	S	L	P	Q	L	G	G	Q	L	S	A	L	Y	P	E	K	Y	I	Y	D	V	A	G	F	P	K	I	R	A	Q	E	L	I	N	N	L	K	E	Q
Template Known Secondary structure																	S													T	T	.	.	.	.								S	S	S	S	S									T	T	S					S	T	T		S	S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		Y	E	K	H	G	I	K	V	L	V	G	E	R	A	I	.	.	T	I	N	R	Q	E	K	V	I	H	S	S	A	G	R	T	V	F	Y	D	K	L	I	M	A	T	G	S	Y	P	W	I	P	P	I	K	G	S	D	T	Q	D	C	F	V	Y	R	T	I	E	D	L	N	A	I	E	S	C	A	R	R	S	K
Query Conservation																	.	.
Alig confidence																	.	.																																																												.
Template Conservation																																																																														.
Template Sequence		M	A	K	F	D	Q	T	I	C	L	E	Q	A	V	E	S	V	E	K	Q	A	D	G	V	F	K	L	V	T	N	E	E	T	H	Y	S	K	T	V	I	I	T	A	G	N	G	A	F	K	P	R	K	L	E	L	E	N	A	E	Q	Y	E	G	K	N	L	H	Y	F	V	D	D	L	Q	K	F	.	A	G	R
Template Known Secondary structure			T	T	S							S										T	T	S							S	S													T	T	S										T	T	G	G	G	G	B	T	T	T			S	S				G	G	G	G	.	T	T	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	A	V	V	G	G	G	L	L	G	L	E	A	A	G	A	L	K	N	L	G	I	E	T	H	V	I	E	F	A	P	M	L	M	A	E	Q	L	D	Q	M	G	G	E	Q	L	R	R	K	I	E	S	M	G	V	R	V	H	T	S	K	N	T	L	E	I	V	Q	E	G	V	E	A	R	K	T	M	R	F
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.
Template Sequence		R	V	A	I	L	G	G	G	D	S	A	V	D	W	A	L	M	L	E	P	I	A	K	E	V	S	I	I	H	R	R	D	K	F	R	A	H	.	.	.	.	.	.	.	E	H	S	V	E	N	L	H	A	S	K	V	N	V	L	T	P	F	V	P	A	E	L	I	G	E	D	K	I	E	Q	L	V	L	E	E
Template Known Secondary structure								S	S											T	T	T	S	S							S	S	S	S		S	S		.	.	.	.	.	.	.										S	S					T	T									S	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		227	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		A	D	G	.	.	.	S	E	L	E	V	D	F	I	V	F	S	T	G	I	R	P	R	D	K	L	A	T	Q	C	G	L	D	V	A	P	R	G	G	I	V	I	N	D	S	C	Q	T	S	D	P	D	I	Y	A	I	G	E	C	A	S	W	N	N	R	V	F	G	L	V	A	P	G	Y	K	M	A	Q	V	A
Query Conservation					.	.	.
Alig confidence					.	.	.																														.																															.
Template Conservation																																					.																															.
Template Sequence		V	K	G	D	R	K	E	I	L	E	I	D	D	L	I	V	N	Y	G	F	V	S	S	L	G	P	I	K	N	W	G	L	D	I	E	.	K	N	S	I	V	V	K	S	T	M	E	T	N	I	E	G	F	F	A	A	G	D	I	C	T	Y	E	G	K	V	.	N	L	I	A	S	G	F	G	E	A	P	T	A
Template Known Secondary structure		T	T	S	S								S													G	G	G	G	G	S						.	T	T						T	T	S	B		S	S	T	T					G	G	G				T	T			.
Template Predicted Secondary structure																																					.																															.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.
		304	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	N	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions