Job Description P08201 Confidence 99.95% Date Thu Jan 5 11:00:55 GMT 2012 Rank 82 Aligned Residues 287 % Identity 21% Template c3f8rD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:thioredoxin reductase (trxb-3); PDBTitle: crystal structure of sulfolobus solfataricus thioredoxin2 reductase b3 in complex with two nadp molecules Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		S	K	V	R	L	A	I	I	G	N	G	M	V	G	H	R	F	I	E	D	L	L	D	K	S	D	A	A	N	F	D	I	T	V	F	C	E	E	P	R	I	A	Y	D	R	V	H	L	S	S	Y	F	S	H	H	.	.	.	T	A	E	E	L	S	L	V	R	E	G	F	Y	E	K	H	G	I	K	V	L	V
Query Conservation																																																									.	.	.
Alig confidence																											.	.	.	.																											.	.	.
Template Conservation																											.	.	.	.
Template Sequence		E	K	F	D	V	I	I	V	G	L	G	P	A	A	Y	G	A	A	L	Y	S	A	R	Y	M	.	.	.	.	L	K	T	L	V	I	G	E	T	P	G	G	Q	L	T	E	A	G	I	V	D	D	Y	L	G	L	I	E	I	Q	A	S	D	M	I	K	V	F	N	K	H	I	E	K	Y	E	V	P	V	L	L
Template Known Secondary structure												S													T	T	.	.	.	.								S	S	T	T	G	G	G	G	G							S	T	T	S	T	T																T	T	T
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		G	E	R	A	I	T	I	N	R	Q	E	K	.	V	I	H	S	S	A	G	R	T	V	F	Y	D	K	L	I	M	A	T	G	S	Y	P	W	I	P	P	I	K	G	S	D	T	Q	D	C	F	V	Y	R	T	I	E	D	L	N	A	I	E	S	C	A	R	R	S	K	R	G	A	V	V	G	G	G	L	L	G
Query Conservation														.
Alig confidence														.																																		.	.	.
Template Conservation																																																.	.	.
Template Sequence		D	I	V	E	K	I	E	N	R	G	D	E	F	V	V	K	T	K	R	K	G	E	F	K	A	D	S	V	I	L	G	I	G	V	K	R	R	K	L	G	V	P	G	E	Q	E	.	.	.	F	A	G	R	G	I	S	Y	C	S	V	C	D	A	P	L	F	K	N	R	V	V	A	V	I	G	G	G	D	S	A
Template Known Secondary structure		S									S	S	S						S	S	S																						T	T	T	T	T	.	.	.	T	B	T	T	T			S						G	G	G	G	T	T								S	S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	A	G	A	L	K	N	L	G	I	E	T	H	V	I	E	F	A	P	M	L	M	A	E	Q	L	D	Q	M	G	G	E	Q	L	R	R	K	I	E	S	M	G	V	R	V	H	T	S	K	N	T	L	E	I	V	Q	E	G	V	E	A	R	K	T	M	R	F	A	D	G	S	E	L	E	V	D	F	I
Query Conservation
Alig confidence																												.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																												.	.	.	.	.	.																														.	.	.	.	.
Template Sequence		L	E	G	A	E	I	L	S	S	Y	S	T	K	V	Y	L	I	H	R	R	D	T	F	K	A	Q	.	.	.	.	.	.	P	I	Y	V	E	T	V	K	K	K	P	N	V	E	F	V	L	N	S	V	V	K	E	I	K	G	D	K	V	.	.	.	.	.	V	K	Q	V	V	V	E	N	L	K	V	N	G	V
Template Known Secondary structure									T	T	T		S							S	S	S	S			S		.	.	.	.	.	.									T		T	T						S									S	S	S	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.																														.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.	.	230	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	S	T	G	I	R	P	R	D	K	L	A	T	Q	C	G	L	D	V	A	P	R	G	G	I	V	I	N	D	S	C	Q	T	S	D	P	D	I	Y	A	I	G	E	C	A	S	W	N	N	R	V	F	G	L	V	A	P	G	Y	K	M	A	Q	V	A	V	D	H	I
Query Conservation
Alig confidence																																																	.
Template Conservation																																																	.
Template Sequence		F	I	E	I	G	F	D	P	P	T	D	F	A	K	S	N	G	I	E	T	D	T	N	G	Y	I	K	V	D	E	W	M	R	T	S	V	P	G	V	F	A	A	G	D	C	T	S	.	A	W	L	G	F	R	Q	V	I	T	A	V	A	Q	G	A	V	A	A	T	S	A
Template Known Secondary structure																	T	T			B		T	T	S	S	B				T	T		B		S	S	T	T					S	T	T	B	S	.	T	T	T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions