Return to main results Retrieve Phyre Job Id

Job DescriptionP08201
Confidence98.22%DateThu Jan 5 11:00:55 GMT 2012
Rank258Aligned Residues175
% Identity10%Templatec3d64A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from2 burkholderia pseudomallei
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.........200.........210.
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  IEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTL
Query Conservation    
   
       
 






 



 
  
   
  



     

   

      
   
   

 
     
 
Alig confidence 















































































Template Conservation     
 
 
   
 

 




 
 

  

  

  
  
 
 
 

     
   
     




  





 


 
Template Sequence  VDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNY
Template Known Secondary structure 



TT


STTT

S
TTT


TTT
S
SSSS
Template Predicted Secondary structure 



























Template SS confidence 















































































   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   212.......220.........230.........240.........250.........260.........270....... ..280... ..
Predicted Secondary structure 































......
Query SS confidence 

































































. .





. . . .

Query Sequence  EIVQEGVEARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIY. . AIGECA. . . . SW
Query Conservation   
       
  
   

  
 

 

 
 
  

  

   

     


 

  



 
 

..



 
....  
Alig confidence 











.........



























.















..





....

Template Conservation   

    
  

......... 







    




 
  
    
.
  

 
       
 


 
  


 
 
Template Sequence  HVINHDHMKAMR. . . . . . . . . HNAIVCNIGHFDSEIDVASTRQYQWENI. KPQVDHIIFPDGKRVILLAEGRLVNLGCAT
Template Known Secondary structure 
SB


.........TT
SSSS
SB

GGGTTS.TT
TTS
GGGSBTS
Template Predicted Secondary structure 



.........













.













Template SS confidence 















































































   323......330.... .....340.........350.........360.. .......370.........380.........390..
 
   286...290.........300.........310......
Predicted Secondary structure 













Query SS confidence 






























Query Sequence  NNRVFGLVAPGYKMAQVAVDHILGSENAFEG
Query Conservation   
    
   
  

 
 
  
 
       
Alig confidence 






























Template Conservation 
 
   

 
 
 
  
   
         
Template Sequence  GHPSFVMSNSFTNQTLAQIELFTRGGEYANK
Template Known Secondary structure 
S
GGGS
SS
Template Predicted Secondary structure 












Template SS confidence 






























   393......400.........410.........420...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions