Job Description P08201 Confidence 99.95% Date Thu Jan 5 11:00:55 GMT 2012 Rank 84 Aligned Residues 290 % Identity 19% Template c3ctyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of t. acidophilum thioredoxin reductase Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		S	K	V	R	L	A	I	I	G	N	G	M	V	G	H	R	F	I	E	D	L	L	D	K	S	D	A	A	N	F	D	I	T	V	F	C	E	E	P	R	I	A	.	.	.	.	Y	D	R	V	H	L	S	S	Y	F	S	H	H	T	A	E	E	L	S	L	V	R	E	G	F	Y	E	K	H	G	I	K	V	L
Query Conservation																																												.	.	.	.
Alig confidence																											.	.	.	.														.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		R	D	F	D	V	V	I	V	G	A	G	A	A	G	F	S	A	A	V	Y	A	A	R	S	G	.	.	.	.	F	S	V	A	I	L	D	K	A	V	A	G	G	L	T	A	E	A	P	L	V	E	N	Y	L	G	F	K	S	I	V	G	S	E	L	A	K	L	F	A	D	H	A	A	N	Y	A	K	I	R	E
Template Known Secondary structure												S													T	T	.	.	.	.								S	S	S	T	T	G	G	G	G	G		S		B			B	T	T	B	S	S	B															T	T	S
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	E	R	A	I	T	I	N	R	Q	E	K	V	I	H	S	S	A	G	R	T	V	F	Y	D	K	L	I	M	A	T	G	S	Y	P	W	I	P	P	I	K	G	S	D	T	Q	D	C	F	V	Y	R	T	I	E	D	L	N	A	I	E	S	C	A	R	R	S	K	R	G	A	V	V	G	G	G	L	L	G
Query Conservation
Alig confidence																																																.	.	.
Template Conservation																																																.	.	.
Template Sequence		G	V	E	V	R	S	I	K	K	T	Q	G	G	F	D	I	E	T	N	D	D	T	Y	H	A	K	Y	V	I	I	T	T	G	T	T	H	K	H	L	G	V	K	G	E	S	E	.	.	.	Y	F	G	K	G	T	S	Y	C	S	T	C	D	G	Y	L	F	K	G	K	R	V	V	T	I	G	G	G	N	S	G
Template Known Secondary structure		T										T	T							S	S	S																					B	T	T	T	T	.	.	.	T	B	T	T	T			S						G	G	G	G	B	T	S								S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		L	E	A	A	G	A	L	K	N	L	G	I	E	T	H	V	I	E	F	A	P	M	L	M	A	E	Q	L	D	Q	M	G	G	E	Q	L	R	R	K	I	E	S	M	G	V	R	V	H	T	S	K	N	T	L	E	I	V	Q	E	G	V	E	A	R	K	T	M	R	F	.	.	.	.	A	D	G	S	E	L	E
Query Conservation																																																																							.	.	.	.
Alig confidence																												.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		A	I	A	A	I	S	M	S	E	Y	V	K	N	V	T	I	I	E	Y	M	P	K	Y	M	C	E	.	.	.	.	.	.	.	N	A	Y	V	Q	E	I	K	K	R	N	I	P	Y	I	M	N	A	Q	V	T	E	I	V	G	D	G	K	K	V	T	G	V	K	Y	K	D	R	T	T	G	E	E	K	L	I	E
Template Known Secondary structure									T	T	T	B	S							S	S	S	S			S		.	.	.	.	.	.	.										T	T						S									S	S	S	S									T	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	F	I	V	F	S	T	G	I	R	P	R	D	K	L	A	T	Q	C	G	L	D	V	A	P	R	G	G	I	V	I	N	D	S	C	Q	T	S	D	P	D	I	Y	A	I	G	E	C	A	S	W	N	N	R	V	F	G	L	V	A	P	G	Y	K	M	A	Q	V	A	V	D	H	I	L
Query Conservation
Alig confidence																																																				.	.	.
Template Conservation																																																				.	.	.
Template Sequence		T	D	G	V	F	I	Y	V	G	L	I	P	Q	T	S	F	L	K	D	S	G	V	K	L	D	E	R	G	Y	I	V	V	D	S	R	Q	R	T	S	V	P	G	V	Y	A	A	G	D	V	T	.	.	.	S	G	N	F	A	Q	I	A	S	A	V	G	D	G	C	K	A	A	L	S	L	Y
Template Known Secondary structure			S													G	G	G	T	T	S				B		T	T	S		B				T	T		B		S	S	T	T					S	T	T	B	.	.	.	T	T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions