Job Description P08201 Confidence 100.00% Date Thu Jan 5 11:00:55 GMT 2012 Rank 28 Aligned Residues 401 % Identity 21% Template c2v6oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin glutathione reductase; PDBTitle: structure of schistosoma mansoni thioredoxin-glutathione2 reductase (smtgr) Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	V	R	L	A	I	I	G	N	G	M	V	G	H	R	F	I	E	D	L	L	D	K	S	D	A	A	N	F	D	I	T	V	F	C	E	E	P	R	I	A	Y	D	R	V	H	L	S	S	Y	F	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.														.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.														.	.	.
Template Sequence		Y	D	Y	D	L	I	V	I	G	G	G	S	G	G	L	A	A	G	K	E	A	A	K	Y	G	.	.	.	.	A	K	T	A	V	L	D	Y	V	E	P	T	P	.	.	.	I	G	T	T	W	G	L	G	G	T	C	V	N	V	G	C	I	P	K	K	L	M	H	Q	A	G	L	L	S	H	A	L	E	D	A
Template Known Secondary structure		S	S									S													T	T	.	.	.	.													T	.	.	.	T						T	T							S
Template Predicted Secondary structure																											.	.	.	.														.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
																										56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	A	E	E	L	S	L	V	R	E	G	F	Y	E	K	H	G	I	K	V	L	V	G	E	R	A	I	T	I	N	R	Q	E	K	V	I	H	S	S	A	G	R	T	.	.	V	F	Y	D	K	L	I	M	A	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																				.	.
Template Conservation																																																		.
Template Sequence		E	H	F	G	W	S	L	D	R	S	K	I	S	H	N	W	S	T	M	V	E	G	V	Q	S	H	I	G	S	L	N	W	G	Y	K	V	A	L	R	D	N	Q	V	T	Y	L	N	A	.	K	G	R	L	I	S	P	H	E	V	Q	I	T	D	K	N	Q	K	V	S	T	I	T	G	N	K	I	I	L	A	T
Template Known Secondary structure				T	T						T	T																														T	T						S	.					S	S	S	S							T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	Y	P	W	I	P	P	I	K	G	S	D	T	Q	D	C	F	V	Y	R	T	I	E	D	L	N	A	I	E	S	C	A	R	R	S	K	R	G	A	V	V	G	G	G	L	L	G	L	E	A	A	G	A	L	K	N	L	G	I	E	T	H	V	I	E	F	A	P	M	L	M	A	E	Q	L	D	Q	M	G
Query Conservation
Alig confidence																				.	.	.	.	.	.	.																																															.	.
Template Conservation																				.	.	.	.	.	.	.																																															.	.
Template Sequence		G	E	R	P	K	Y	P	E	I	P	G	A	V	E	Y	G	I	T	.	.	.	.	.	.	.	S	D	D	L	F	S	L	P	Y	F	P	G	K	T	L	V	I	G	A	S	Y	V	A	L	E	C	A	G	F	L	A	S	L	G	G	D	V	T	V	M	V	R	S	I	L	L	.	.	R	G	F	D	Q	Q	M
Template Known Secondary structure									S	S	T	T						B		.	.	.	.	.	.	.					T	T		S	S				S							S													T	T								S	S		S	S	.	.	T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.																																															.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.								.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.										.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																	.	.																			.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.																	.	.																			.	.
Query Sequence		G	E	Q	L	R	R	K	I	E	S	M	G	V	R	V	H	T	S	K	N	T	L	E	I	V	Q	.	.	.	.	.	.	.	.	.	E	G	V	E	A	R	K	T	M	R	F	A	D	G	S	E	.	.	L	E	V	D	F	I	V	F	S	T	G	I	R	P	R	D	K	L	.	.	A	T	Q	C	G	L	D
Query Conservation																												.	.	.	.	.	.	.	.	.																	.	.																			.	.
Alig confidence																												.	.	.	.	.	.	.	.	.																	.	.																			.	.
Template Conservation
Template Sequence		A	E	K	V	G	D	Y	M	E	N	H	G	V	K	F	A	K	L	C	V	P	D	E	I	K	Q	L	K	V	V	D	T	E	N	N	K	P	G	L	L	L	V	K	G	H	Y	T	D	G	K	K	F	E	E	E	F	E	T	V	I	F	A	V	G	R	E	P	Q	L	S	K	V	L	C	E	T	V	G	V	K
Template Known Secondary structure											T	T	T					T	T													B	T	T	T	T	B											T	T	S								S						S						T	T	T	T	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	P	R	G	G	I	V	I	N	D	S	C	Q	T	S	D	P	D	I	Y	A	I	G	E	C	A	S	W	N	N	R	V	F	G	L	V	A	P	G	Y	K	M	A	Q	V	A	V	D	H	I	L	G	S	E	N	A	F	E	G	A	D	L	S	A	K	L	K	L	L	G	V	D	V	G	G	I	G	D	A
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		L	D	K	N	G	R	V	V	C	T	D	D	E	Q	T	T	V	S	N	V	Y	A	I	G	D	I	N	.	.	.	A	G	K	P	Q	L	T	P	V	A	I	Q	A	G	R	Y	L	A	R	R	L	F	A	G	A	T	E	L	T	D	Y	S	N	V	A	T	T	V	F	T	P	L	E	Y	G	A	C	G	L	S
Template Known Secondary structure		B		T	T	S		B				T	T		B		S	S	T	T					G	G	G	B	.	.	.	T	T	S																				S									T	T							S	S	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.				.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		337	.	.	340	.					.	.	.	.	.	.	.	.	350	.	.	.	.													.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.										.													.
Query SS confidence							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.										.													.
Query Sequence		H	G	R	T	P	.	.	.	.	G	A	R	S	Y	V	Y	L	D	E	S	K	E	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	K	R	L	I	V	S	E	.	D	N	K	T	L	L	G	A	V	L	V	G	.	D	T	S	D	Y	G	N	L	L	Q	L	V	L	N	A	I	E	L	P	E	N	P	D
Query Conservation							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.										.													.
Alig confidence							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.										.													.
Template Conservation
Template Sequence		E	E	D	A	I	E	K	Y	G	D	K	D	I	E	V	Y	H	S	N	F	K	P	L	E	W	T	V	A	H	R	E	D	N	V	C	Y	M	K	L	V	C	R	K	S	D	N	M	R	V	L	G	L	H	V	L	G	P	N	A	G	E	I	T	Q	G	Y	A	V	A	I	K	M	G	A	T	K	A	D	F	D
Template Known Secondary structure											G	G	G																T	T			S	S										T	T	T	T	T									S	T	T														T			B
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	I	L	P	A	H	S	G	S	G	K	P	S	I	G	V	D	K	L	P	D	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	I	G	I	H	P	T	C	S	E	T	F	T	T	L	H	V	T	K	K	S	G	V
Template Known Secondary structure			S				T	T		S	G	G	G	G	T	T				B	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.