Job Description P08201 Confidence 100.00% Date Thu Jan 5 11:00:55 GMT 2012 Rank 23 Aligned Residues 202 % Identity 22% Template c2v4jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration Resolution 2.10 Å

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		565	.	.	.	.	570	.	.	.	.	.	.		.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.		.	.	.	.	.	.	.	600	.		.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
Predicted Secondary structure														.																	.										.
Query SS confidence														.																	.										.
Query Sequence		Y	S	V	I	P	R	S	P	G	G	E	I	.	T	P	E	G	L	M	A	V	G	R	I	A	R	E	F	N	.	L	Y	T	K	I	T	G	S	Q	.	R	L	A	M	F	G	A	Q	K	D	D	L	P	E	I	W	R	Q	L	I	E	A	G	F	E	T	G	H	A	Y	A	K	A	L	R	M	A	K	T	C
Query Conservation														.																	.										.
Alig confidence														.																	.										.
Template Conservation
Template Sequence		H	T	V	R	V	A	Q	P	S	G	K	Y	Y	S	A	D	Y	L	R	Q	L	C	D	I	W	D	L	R	G	S	G	L	T	N	M	H	G	S	T	G	D	I	V	L	L	G	T	Q	T	P	Q	L	E	E	I	F	F	E	L	T	H	N	L	N	T	D	L	G	G	S	G	S	N	L	R	T	P	E	S	C
Template Known Secondary structure										T	T																			S		S				S			T	T	S																						T	S				B				S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.					.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.		.	690	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.																							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	S	T	W	C	R	Y	G	V	G	D	S	V	G	L	G	V	E	L	E	N	R	Y	K	.	.	.	.	G	I	R	T	P	H	K	M	K	F	G	V	S	G	C	T	R	E	C	S	E	A	.	Q	G	K	D	V	G	I	I	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.	.																							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.																							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	K	S	R	C	E	F	A	C	Y	D	S	Q	A	A	C	Y	E	L	T	M	E	Y	Q	D	E	L	H	R	P	A	F	P	Y	K	F	K	F	K	F	D	A	C	P	N	G	C	V	A	S	I	A	R	S	D	F	S	V	I	G	T	W	K	D	D	I	K	I	D	A	E	A	V	K	A	Y	V	A	G
Template Known Secondary structure			G	G	G	S		T	T		S	S													T						S			S	S	S		B						S	S	T	T		T	T							S								S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
																																																																		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	G	W	N	L	Y	V	C	G	N	G	G	M	K	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		E	F	K	P	N	A	G	A	H	S	G	R	D	W	G	K	F	D	I	E	A	E	V	V	N	R	C	P	S	K	C	M	K	W	D	G	S	K	L	S	I	D	N	K	E	C	V	R	C	M	H	C	I	N	T	M	P	R	A	L	H	I	G	D	E	R	G	A	S	I	L	C	G	A	K	A	P	I	L	D
Template Known Secondary structure		S	S		G	G	G	G	T	T	T	T	S				S							T	G	G	G		T	T							S	S						G	G	G					S							T	T	T					S	S										B		S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
			714	.	.	.	.	.	720	.	.	.	.	.	.	.					.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.
Predicted Secondary structure		.															.	.	.	.
Query SS confidence		.															.	.	.	.
Query Sequence		.	P	R	H	A	D	L	L	A	A	D	I	D	R	E	.	.	.	.	T	L	I	K	Y	L	D	R	F	M	M	F	Y	I	R	T	A	D	K	L	T	R	T	A	P	W	L	E	N	L	E	G	G	I	D	Y	L	K	A	V	I
Query Conservation		.															.	.	.	.
Alig confidence		.															.	.	.	.																															.	.
Template Conservation																																																			.	.
Template Sequence		G	A	Q	M	G	S	L	L	V	P	F	V	A	A	E	E	P	F	D	E	I	K	E	V	V	E	K	I	W	D	W	W	M	E	E	G	K	N	R	E	R	L	G	E	T	M	K	R	L	.	.	S	F	Q	K	L	L	E	V	T
Template Known Secondary structure				B													T	T																			S		T	T											.	.									T
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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