Job Description P08201 Confidence 99.92% Date Thu Jan 5 11:00:55 GMT 2012 Rank 96 Aligned Residues 289 % Identity 18% Template c2q0lA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: helicobacter pylori thioredoxin reductase reduced by sodium dithionite2 in complex with nadp+ Resolution 1.45 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.
Query Sequence		V	R	L	A	I	I	G	N	G	M	V	G	H	R	F	I	E	D	L	L	D	K	S	D	A	A	N	F	D	I	T	V	F	C	E	E	P	R	I	A	Y	D	R	V	H	L	.	.	.	.	.	.	S	S	Y	F	S	H	H	T	A	E	E	L	S	L	V	R	E	G	F	Y	E	K	H	G	I	K	V	L
Query Conservation																																																.	.	.	.	.	.
Alig confidence																									.	.	.	.																				.	.	.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		I	D	C	A	I	I	G	G	G	P	A	G	L	S	A	G	L	Y	A	T	R	G	G	.	.	.	.	V	K	N	A	V	L	F	E	K	G	M	P	G	G	Q	I	T	G	S	S	E	I	E	N	Y	P	G	V	K	E	V	V	S	G	L	D	F	M	Q	P	W	Q	E	Q	C	F	R	F	G	L	K	H	E
Template Known Secondary structure										S													T	T	.	.	.	.		S	S						S	S	S	T	T		G	G	G	G		S		B			S	T	T			S		B															T	T	S
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		V	G	E	R	A	I	T	I	N	R	Q	E	K	.	V	I	H	S	S	A	G	R	T	V	F	Y	D	K	L	I	M	A	T	G	S	Y	P	W	I	P	P	I	K	G	S	D	T	Q	D	C	F	V	Y	R	T	I	E	D	L	N	A	I	E	S	C	A	R	R	S	K	R	G	A	V	V	G	G	G	L	L
Query Conservation															.
Alig confidence															.																																		.	.	.
Template Conservation																																																	.	.	.
Template Sequence		M	T	A	V	Q	R	V	S	K	K	D	S	H	F	V	I	L	A	E	D	G	K	T	F	E	A	K	S	V	I	I	A	T	G	G	S	P	K	R	T	G	I	K	G	E	S	E	.	.	.	Y	W	G	K	G	V	S	T	C	A	T	C	D	G	F	F	Y	K	N	K	E	V	A	V	L	G	G	G	D	T
Template Known Secondary structure			S									T	T							T	T	S																						B	T				.	.	.		B	T	T	T			S						G	G	G	G	T	T	S								S
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		G	L	E	A	A	G	A	L	K	N	L	G	I	E	T	H	V	I	E	F	A	P	M	L	M	A	E	Q	L	D	Q	M	G	G	E	Q	L	R	R	K	I	E	S	M	G	V	R	V	H	T	S	K	N	T	L	E	I	V	Q	E	G	V	E	A	R	K	T	M	R	F	.	.	.	.	A	D	G	S	E	L
Query Conservation																																																																								.	.	.	.
Alig confidence																													.	.	.	.	.	.																																						.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		A	V	E	E	A	I	Y	L	A	N	I	C	K	K	V	Y	L	I	H	R	R	D	G	F	R	C	A	.	.	.	.	.	.	P	I	T	L	E	H	A	K	N	N	D	K	I	E	F	L	T	P	Y	V	V	E	E	I	K	G	D	A	S	G	V	S	S	L	S	I	K	N	T	A	T	N	E	K	R	E	L
Template Known Secondary structure											T	T	S	S							S	S	S	S			S		.	.	.	.	.	.									T		T	T					T	T										T	T										T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		E	V	D	F	I	V	F	S	T	G	I	R	P	R	D	K	L	.	.	.	.	A	T	Q	C	G	L	D	V	A	P	R	G	G	I	V	I	N	D	S	C	Q	T	S	D	P	D	I	Y	A	I	G	E	C	A	S	W	N	N	R	V	F	G	L	V	A	P	G	Y	K	M	A	Q	V	A	V	D	H	I	L
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																																								.	.	.
Template Conservation																																																														.	.	.
Template Sequence		V	V	P	G	F	F	I	F	V	G	Y	D	V	N	N	A	V	L	K	Q	E	D	N	S	M	L	C	K	C	D	E	Y	G	S	I	V	V	D	F	S	M	K	T	N	V	Q	G	L	F	A	A	G	D	I	R	I	F	A	P	K	.	.	.	Q	V	V	C	A	A	S	D	G	A	T	A	A	L	S	V	I
Template Known Secondary structure				S						S							G	G	G	B		T	T	S		B	S	S		B		T	T	S		B				T	T		B		S	S	T	T					S	T	T	B	T	T				.	.	.
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions