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Job DescriptionP08201
Confidence100.00%DateThu Jan 5 11:00:55 GMT 2012
Rank6Aligned Residues385
% Identity23%Templatec2gr2A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ferredoxin reductase; PDBTitle: crystal structure of ferredoxin reductase, bpha4 (oxidized form)
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGE
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Template Sequence  LKA. PVVVLGAGLASVSFVAELRQAGYQ. . GLITVVGDEAERPYDRPPLSKDFMAHG. . DAEKIRLDCKRAPEVEWLLGV
Template Known Secondary structure 

S.S

ST

..S
SS
S

B
SGGGGT
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GGGSB


TTS
S
T
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   6.. .10.........20.........30.. .......40.........50......... 60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  RAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
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Template Sequence  TAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLEL
Template Known Secondary structure 
TTTTTTS

S





GGGTT
SS


SSTT

TT


S
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELEVDFIVFS
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Template Sequence  AATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDG. . . . . . VVLLDDGTRIAADMVVVG
Template Known Secondary structure  TT
SSSSS
TTTS
TT
T

TT......TTS

S
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   161........170.........180.........190.........200.........210...... ...220.........230....
 
   241........250.........260.........270.........280.........290. ........300.........310....
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Query Sequence  TGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRVFG. . . . . . LVAPGYKMAQVAVDHILGSENAF
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Template Sequence  IGVLANDALARAAGLACD. . DGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPG
Template Known Secondary structure  S


T

BS..SS

TT
B
SSTT
GGGTTTT




TTS

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   235....240.........250.. .......260.........270.........280.........290.........300.........310..
 
   315....320.........330.........340.........350.........360.........370.........380.........390....
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Query Sequence  EGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELP
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Template Sequence  YAELPWYWSDQGALRIQVAGLASGD. . EEIVRGEVSLDAPKFTLIELQKG. . RIVGATCVNNARDFAPLRRLLAVGAKPD
Template Known Secondary structure 




TT
S

S..S


SSS

TT..S
TT



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   313......320.........330....... ..340.........350.........360 .........370.........380........
 
   395....400....
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Query Sequence  ENPDSLILPA
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Template Sequence  . . RAALADPA
Template Known Secondary structure  ..STT
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   389390......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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