Job Description P08201 Confidence 98.84% Date Thu Jan 5 11:00:55 GMT 2012 Rank 208 Aligned Residues 109 % Identity 21% Template c2gmhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:electron transfer flavoprotein-ubiquinone PDBTitle: structure of porcine electron transfer flavoprotein-2 ubiquinone oxidoreductase in complexed with ubiquinone Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	K	V	R	L	A	I	I	G	N	G	M	V	G	H	R	F	I	E	D	L	L	D	.	.	.	.	.	.	K	S	D	A	A	N	F	D	I	T	V	F	C	E	E	P	R	I	A	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.			.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		A	E	E	A	D	V	V	I	V	G	A	G	P	A	G	L	S	A	A	T	R	L	K	Q	L	A	A	Q	H	E	K	D	.	.	.	.	L	R	V	C	L	V	E	K	A	A	H	I	G	A	H	T	L	S	G	A	C	L	D	P	R	A	F	E	E	L	F	P	D	W	K	E	K	G	A	P	L	N	T	P
Template Known Secondary structure						S							S																	T	T			.	.	.	.								S	S	S	S	T	T	T	T									T								T	T					T
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
																								46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	H	L	S	S	Y	F	S	H	H	T	A	E	E	L	S	L	V	R	E	G	F	Y	E	K	H	G	I	K	V	L	V	G	E	R	A	I	T	I	N	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	E	D	R	F	G	I	L	T	E	K	Y	R	I	P	V	P	I	L	P	G	L	P	M	N	N	H	G	N	Y	V	V	R	L	G	H	L	V	S	W	M	G	E	Q	A	E	A	L	G	V	E	V	Y	P	G	Y	A	A	A	E	I	L	F	H	E	D	G	S	V	K	G	I	A	T	N	D	V	G	I
Template Known Secondary structure												S	S									T	T	S	T	T			T	T																				T	T					T	T										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
						89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	E	K	V	I	H	S	S	A	G	R	T	V	F	Y	D	K	L	I	M	A	T	G	S	Y	P
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		Q	K	D	G	A	P	K	T	T	F	E	R	G	L	E	L	H	A	K	V	T	I	F	A	E	G	C	H	G
Template Known Secondary structure			T	T	S															S								T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions