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Job DescriptionP08201
Confidence100.00%DateThu Jan 5 11:00:55 GMT 2012
Rank36Aligned Residues375
% Identity19%Templatec2c3dB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:2-oxopropyl-com reductase; PDBTitle: 2.15 angstrom crystal structure of 2-ketopropyl coenzyme m2 oxidoreductase carboxylase with a coenzyme m disulfide3 bound at the active site
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40...
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Query Sequence  SKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  REYDAIFIGGGAAGRFGSAYLRAMG. . . . GRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTE
Template Known Secondary structure 

BS

STT....

SSSSSSTSTTTSTT



TT
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   42.......50.........60...... ...70.........80.........90.........100.........110.......
 
   44.....50.........60.........70.........80.........90.........100.........110.........120.
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Query Sequence  . . YDRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGS
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Template Sequence  KVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEA. . . AGKVFKAKNLILAVGAGPGTLDVPGV
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TTS


S


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STTT
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   118.120.........130.........140.........150.........160........ .170.........180.........190....
 
   122.......130.........140.........150.........160.........170.........180.........190.........200.
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Query Sequence  DTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMG
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Template Sequence  NAKGVFDH. . . . ATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI. KDNETRAYVLDRMKEQG
Template Known Secondary structure  TSBT
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   195....200.. .......210.........220.........230.........240.........250.. .......260.........
 
   202.......210.........220....... ..230.........240......... 250.........260.........270.......
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Query Sequence  VRVHTSKNTLEIVQEGVEARKTMRFA. . . DGSELEVDFIVFSTGIRPRDKL. ATQCGLDVAPRGGIVINDSCQTSDPDIY
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Template Sequence  MEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTSVPNVY
Template Known Secondary structure 

S

TTSBTT
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T

B
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B


TTSB
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   270.........280.........290.........300.........310.........320.........330.........340.........
 
   278.280.........290.........300.........310.........320.........330....... ..340.........350.....
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Query Sequence  AIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAH. . GRTPGARSYVYLDESKEI
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Template Sequence  AVGDLIG. . . . GPMEMFKARKSGCYAARNVMGEKISYTPKNYPDFL. HTHYEVSFLGMGEEEARAAGHEIVTIKMPPDTE
Template Known Secondary structure 
GGGG
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   350...... ...360.........370.........380.........390. ........400.........410.........420....
 
   356...360.........370...... ...380.........390...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . YKRLIVSEDNKTLLGAVLVGD. . TSDYGNLLQLVLNAIEL
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Template Sequence  NGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTV
Template Known Secondary structure  TTT
SS
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TTTSTTTGGGG
TTT
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B
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   425....430.........440.........450.........460.........470.........480.........490.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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