Job Description P08201 Confidence 100.00% Date Thu Jan 5 11:00:55 GMT 2012 Rank 17 Aligned Residues 404 % Identity 22% Template c2bcpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh oxidase; PDBTitle: structural analysis of streptococcus pyogenes nadh oxidase:2 c44s nox with azide Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		M	S	K	V	R	L	A	I	I	G	N	G	M	V	G	H	R	F	I	E	D	L	L	D	K	S	D	A	A	N	F	D	I	T	V	F	C	E	E	P	R	I	A	Y	D	R	V	H	L	S	S	Y	F	S	H	H	.	.	T	A	E	E	L	S	L	V	R	E	G	F	Y	E	K	H	G	I	K	V	L	V
Query Conservation																																																										.	.
Alig confidence					.																										.																											.	.
Template Conservation					.																										.
Template Sequence		W	G	S	.	K	I	V	V	V	G	A	N	H	A	G	T	A	C	I	K	T	M	L	T	N	Y	G	D	A	.	N	E	I	V	V	F	D	Q	N	S	N	I	S	F	L	G	S	G	M	A	L	W	I	G	E	Q	I	A	G	P	E	G	L	F	Y	S	D	K	E	E	L	E	S	L	G	A	K	V	Y	M
Template Known Secondary structure					.								S															G	G	G	.	S							S	S	S				B		T	T							T	T	S	S	S	S	S	T	T	S	B									T	T	T					T
Template Predicted Secondary structure					.																										.
Template SS confidence
		0	.	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.												.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																							.	.	.																								.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																							.	.	.																								.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		G	E	R	A	I	T	I	N	R	Q	E	K	V	I	H	S	S	A	G	R	T	.	.	.	V	F	Y	D	K	L	I	M	A	T	G	S	Y	P	W	I	P	P	I	K	G	S	D	.	.	.	.	.	.	.	.	.	.	.	T	Q	D	C	F	V	Y	R	T	I	E	D	L	N	A	I	E	S	C	A	R	.
Query Conservation																							.	.	.																								.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																							.	.	.																								.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		E	S	P	V	Q	S	I	D	Y	D	A	K	T	V	T	A	L	V	D	G	K	N	H	V	E	T	Y	D	K	L	I	F	A	T	G	S	Q	P	I	L	P	P	I	K	G	A	E	I	K	E	G	S	L	E	F	E	A	T	L	E	N	L	Q	F	V	K	L	Y	Q	N	S	A	D	V	I	A	K	L	E	N
Template Known Secondary structure		T								T	T	T	T						S	S	S	S							S														S		B	T			B		T	T		S	S			B	S	S	T	T					S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
			144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	S	K	R	G	A	V	V	G	G	G	L	L	G	L	E	A	A	G	A	L	K	N	L	G	I	E	T	H	V	I	E	F	A	P	M	L	M	A	E	Q	L	D	Q	M	G	G	E	Q	L	R	R	K	I	E	S	M	G	V	R	V	H	T	S	K	N	T	L	E	I	V	Q	E	G	V	E	A	R	K
Query Conservation		.
Alig confidence		.																																																																													.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		K	D	I	K	R	V	A	V	V	G	A	G	Y	I	G	V	E	L	A	E	A	F	Q	R	K	G	K	E	V	V	L	I	D	V	V	D	T	C	L	A	G	Y	Y	D	R	D	L	T	D	L	M	A	K	N	M	E	E	H	G	I	Q	L	A	F	G	E	T	V	K	E	V	A	G	N	G	K	V	.	.	.
Template Known Secondary structure		T	T										S													T	T								S	S	S	S	S	S	T	T	T	S														T	T	T						S									S	S	S		.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.							.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.
Query Sequence		T	M	R	F	A	D	G	S	E	L	E	V	D	F	I	V	F	S	T	G	I	R	P	R	D	K	L	A	T	Q	C	G	L	D	V	A	P	R	G	G	I	V	I	N	D	S	C	Q	T	S	D	P	D	I	Y	A	I	G	E	C	A	S	W	N	.	.	.	.	.	.	N	R	V	F	G	L	V	A	P	G
Query Conservation																																																																		.	.	.	.	.	.
Alig confidence																														.																																				.	.	.	.	.	.
Template Conservation																														.
Template Sequence		E	K	I	I	T	D	K	N	E	Y	D	V	D	M	V	I	L	A	V	G	F	R	P	N	T	T	L	G	.	N	G	K	I	D	L	F	R	N	G	A	F	L	V	N	K	R	Q	E	T	S	I	P	G	V	Y	A	I	G	D	C	A	T	I	Y	D	N	A	T	R	D	T	N	Y	I	A	L	A	S	N	A
Template Known Secondary structure							S	S						S													G	G	G	.	T	T	S	S		B		T	T	S		B				T	T		B		S	S	T	T					G	G	G	B					T	T	T	T
Template Predicted Secondary structure																														.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.												350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																											.	.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	K	M	A	Q	V	A	V	D	H	I	L	G	S	E	N	A	F	E	G	A	D	L	S	A	K	L	K	L	L	G	V	D	V	G	G	I	G	D	A	H	.	.	G	R	T	P	G	A	R	S	Y	V	Y	L	.	.	.	.	.	.	.	.	.	.	.	D	E	S	K	E	I	Y	K	R	L	I	V	S	E
Query Conservation																																											.	.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	T	G	I	V	A	A	H	N	A	C	G	T	D	L	E	G	I	G	V	Q	G	S	N	G	I	S	I	Y	G	L	H	M	V	S	T	G	L	T	L	E	K	A	K	R	L	G	F	D	A	A	V	T	E	Y	T	D	N	Q	K	P	E	F	I	E	H	G	N	F	P	V	T	I	K	I	V	Y	D	K
Template Known Secondary structure													T	T								B									T	T																T	T												S	S		T	T			S	S												T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.		.			.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure														.		.	.
Query SS confidence														.		.	.
Query Sequence		D	N	K	T	L	L	G	A	V	L	V	G	.	D	.	.	T	S	D	Y	G	N	L	L	Q	L	V	L	N	A	I	E	L	P	E	N	P	D	S	L	I	L	P	A	H	S	G	S	G	K
Query Conservation														.		.	.
Alig confidence														.		.	.
Template Conservation
Template Sequence		D	S	R	R	I	L	G	A	Q	M	A	A	R	E	D	V	S	M	G	I	H	M	F	S	L	A	I	Q	E	G	V	T	I	E	K	L	A	L	T	D	I	F	F	L	P	H	F	N	K	P
Template Known Secondary structure		T	T		B									S	S			T	T												T		B						T	S						T	T	T			T
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.