Job Description P08201 Confidence 100.00% Date Thu Jan 5 11:00:55 GMT 2012 Rank 3 Aligned Residues 274 % Identity 19% Template c1zj8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable ferredoxin-dependent nitrite reductase nira; PDBTitle: structure of mycobacterium tuberculosis nira protein Resolution 2.80 Å

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		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	S	R	Q	E	L	F	H	L	I	R	V	E	G	I	K	T	F	E	E	L	L	A	K	H	G	K	G	Y	G	C	E	V	C	K	P	T	V	G	S	L	L	A	S	C	W	N	E	Y	I	L	K	P	E	H	T	P	L	Q	D	S	N	D	N	F	L	A	N	I	Q	K	D	G	T	Y	S	V	I	P
Query Conservation
Alig confidence														.																															.	.
Template Conservation														.																															.	.
Template Sequence		P	L	N	A	N	E	E	L	K	K	A	G	.	N	P	L	D	V	R	E	R	I	E	N	I	Y	A	K	Q	G	F	D	S	I	D	K	T	D	L	R	G	R	F	.	.	R	W	W	G	L	Y	T	Q	R	E	Q	G	Y	D	G	T	W	T	G	D	D	N	I	D	K	L	E	A	K	Y	F	M	M	R	V
Template Known Secondary structure				S						G	G	G	S	.		G	G	G								T						G	G	G	S						T	T	G	G	.	.	G	G	G	T							T	T			T	T	T		S	G	G	G
Template Predicted Secondary structure														.																															.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.		.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		R	S	P	G	G	E	I	T	P	E	G	L	M	A	V	G	R	I	A	R	E	F	N	.	L	Y	T	K	I	T	G	S	Q	R	L	A	M	F	G	A	Q	K	D	D	L	P	E	I	W	R	Q	L	I	E	A	G	F	E	T	G	H	A	Y	A	K	A	L	R	M	A	K	T	C	V	G	S	T	W	C	R
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		R	C	D	G	G	A	L	S	A	A	A	L	R	T	L	G	Q	I	S	T	E	F	A	R	D	T	A	D	I	S	D	R	Q	N	V	Q	Y	H	W	I	E	V	E	N	V	P	E	I	W	R	R	L	D	D	V	G	L	Q	T	T	E	A	C	G	D	C	P	R	V	V	L	G	S	P	L	A	G	E	S	L
Template Known Secondary structure		B		G	G	G																		S	T	T						T	T	S									G	G	G										T	T	T		B		T	T	S	S	S	S	S								T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.					670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700						.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																																.	.	.	.	.
Query SS confidence																							.	.	.	.																																.	.	.	.	.
Query Sequence		Y	G	V	G	D	S	V	G	L	G	V	E	L	E	N	R	Y	K	G	I	R	.	.	.	.	T	P	H	K	M	K	F	G	V	S	G	C	T	R	E	C	S	E	A	Q	G	K	D	V	G	I	I	A	T	E	K	.	.	.	.	.	G	W	N	L	Y	V	C	G	N	G	G	M	K	P	R	H	A	D	L
Query Conservation																							.	.	.	.																																.	.	.	.	.
Alig confidence																							.	.	.	.																	.	.														.	.	.	.	.
Template Conservation																																											.	.
Template Sequence		D	E	V	L	D	P	T	W	A	I	E	E	I	V	R	R	Y	I	G	K	P	D	F	A	D	L	P	R	K	Y	K	T	A	I	S	G	L	Q	D	V	A	.	.	H	E	I	N	D	V	A	F	I	G	V	N	H	P	E	H	G	P	G	L	D	L	W	V	G	G	G	L	S	T	N	P	M	L	A	Q	R
Template Known Secondary structure		S		S			T												T	T	S	G	G	G	S			S	S								S	S	S		S		.	.	G	G	G	S	S									T	T	T											B		S	S	S		B
Template Predicted Secondary structure																																											.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.					.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		L	A	A	D	I	D	R	E	T	L	I	K	Y	L	D	R	F	M	M	F	Y	I	R	T	A	D	K	L	T	.	.	.	.	R	T	A	P	W	L	E	N	L	E	G	G	I	D	Y	L	K	A	V	I	I	D
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.										.	.
Template Conservation																																												.	.
Template Sequence		V	G	A	W	V	P	L	G	E	V	P	E	V	W	A	A	V	T	S	V	F	R	D	Y	G	Y	R	R	L	R	A	K	A	R	L	K	F	L	I	K	D	W	.	.	G	I	A	K	F	R	E	V	L	E	T
Template Known Secondary structure								G	G	G																S			S	S	G	G	G		S									.	.
Template Predicted Secondary structure																																												.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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