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Job DescriptionP08201
Confidence100.00%DateThu Jan 5 11:00:55 GMT 2012
Rank11Aligned Residues397
% Identity20%Templatec1yqzA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:coenzyme a disulfide reductase; PDBTitle: structure of coenzyme a-disulfide reductase from2 staphylococcus aureus refined at 1.54 angstrom resolution
Resolution1.54 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50...... ...60.........70.........80
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Query Sequence  VRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHH. . . TAEELSLVREGFYEKHGIKVLVGE
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Template Sequence  PKIVVVGAVAGGATCASQIRRLDK. . ESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYH
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STT
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   2.......10.........20..... ....30.........40.........50.........60.........70.........
 
   81........90........ .100.........110.........120.........130.........140... ......150...
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Query Sequence  RAITINRQEKVIHSSAGR. . . . . TVFYDKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCAR. . RSKRGAVVGG
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Template Sequence  EVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDIT. . . FTLRNLEDTDAIDQFIKANQVDKVLVVGA
Template Known Secondary structure  TTTTTTTT
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   80.........90.........100.........110.........120....... ..130.........140.........150......
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  GLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELE
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Template Sequence  GYVSLEVLENLYERGLHPTLIHRSDKINKL. MDADMNQPILDELDKREIPYRLNEEINAINGN. . . . . . EITFKSGKVEH
Template Known Secondary structure  ST
SSS

STT.S
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   157..160.........170.........180...... ...190.........200.........210........ .220.........
 
   234.....240.........250.........260.........270.........280......... 290.........300.......
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Query Sequence  VDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRV. . . . . . FGLVAPGYKMAQVAVDHI
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Template Sequence  YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQI
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   230.........240.........250.........260.........270.........280.........290.........300.........
 
   308.310.. .......320.........330.........340.........350. ........360.........370.....
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Query Sequence  LGSEN. AFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDE. . . . . . . . . . SKEIYKRLIVSEDNKTLLGAVLVG.
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Template Sequence  AGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGK
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TTS
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   310.........320.........330.........340.........350.........360.........370.........380.........
 
   376 ...380.........390.........400.........410..
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Query Sequence  D. . TSDYGNLLQLVLNAIELPENPDSLILPAHSGSGKPS
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Template Sequence  EGADKRIDVLSMAMMNQLTVDELTEFEVAYAPPYSHPKD
Template Known Secondary structure  SSTT
BSGGGGG





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   390.........400.........410.........420........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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