Job Description P08201 Confidence 99.94% Date Thu Jan 5 11:00:55 GMT 2012 Rank 85 Aligned Residues 293 % Identity 20% Template c1lqtB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:fpra; PDBTitle: a covalent modification of nadp+ revealed by the atomic resolution2 structure of fpra, a mycobacterium tuberculosis oxidoreductase Resolution 1.05 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		S	K	V	R	L	A	I	I	G	N	G	M	V	G	H	R	F	I	E	D	L	L	D	K	.	.	.	S	D	A	A	N	F	D	I	T	V	F	C	E	E	P	R	I	A	Y	D	R	V	H	L	S	S	Y	F	S	H	H	T	A	E	E	L	S	L	V	R	E	G	F	Y	E	K	H	G	I	K	V	L	V
Query Conservation																										.	.	.
Alig confidence																										.	.	.																				.
Template Conservation																																																.
Template Sequence		R	P	Y	Y	I	A	I	V	G	S	G	P	S	A	F	F	A	A	A	S	L	L	K	A	A	D	T	T	E	D	L	D	M	A	V	D	M	L	E	M	L	P	T	P	W	G	.	L	V	R	S	G	V	A	P	D	H	P	K	I	K	S	I	S	K	Q	F	E	K	T	A	E	D	P	R	F	R	F	F	G
Template Known Secondary structure												S																	S	T	T										S	S	S	S		S	T	.					T	S		T	T		T	T	G	G	G	G									T	S	T	T
Template Predicted Secondary structure																																																.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.
Predicted Secondary structure																																			.																																	.	.	.	.	.	.
Query SS confidence																																			.																																	.	.	.	.	.	.
Query Sequence		G	E	R	A	I	T	I	N	R	Q	E	K	V	I	H	S	S	A	G	R	T	V	F	Y	D	K	L	I	M	A	T	G	S	.	Y	P	W	I	P	P	I	K	G	S	D	T	Q	D	C	F	V	Y	R	T	I	E	D	L	N	A	I	E	S	C	A	R	.	.	.	.	.	.	R	S	K	R	G	A	V	V
Query Conservation																																			.																																	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.												.												.																																	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.												.
Template Sequence		N	V	V	V	.	.	.	.	.	.	G	E	H	V	Q	P	G	E	L	S	E	.	R	Y	D	A	V	I	Y	A	V	G	A	Q	S	D	R	M	L	N	I	P	G	E	D	L	P	G	S	I	A	A	V	D	F	V	G	W	Y	N	A	H	P	H	F	E	Q	V	S	P	D	L	S	G	A	R	A	V	V	I
Template Known Secondary structure		S			B	.	.	.	.	.	.	T	T	T	B								.		S	S																	T	T	T	T	S	T	T												T	T		G	G	G	T	T							S	S
Template Predicted Secondary structure						.	.	.	.	.	.												.
Template SS confidence
		81	.	.	.							.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	G	L	L	G	L	E	A	A	G	A	L	K	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	E	T	H	V	I	E	F	A	P	M	L	M	A	E	Q	L	D	Q	M	G	G	E	Q	L	R	R	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	G	N	V	A	L	D	V	A	R	I	L	L	T	D	P	D	V	L	A	R	T	D	I	A	D	H	A	L	E	S	L	R	P	R	G	I	Q	E	V	V	I	V	G	R	R	G	P	L	Q	A	A	F	T	T	L	E	L	R	E	L	A	D	L	D	G	V	D	V	V	I	D	P	A	E	L	D	G	I
Template Known Secondary structure			S	S												S						T	T	S											T	T											S	S		G	G	G										G	G	G	G		T	T							G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
																															198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	M	G	V	R	V	H	T	S	K	N	T	L	E	I	V	Q	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	A	R	K	T	M	R	F	A	D	G	S	E	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	E	D	A	A	A	V	G	K	V	C	K	Q	N	I	K	V	L	R	G	Y	A	D	R	E	P	R	P	G	H	R	R	M	V	F	R	F	L	T	S	P	I	E	I	K	G	K	R	K	V	E	R	I	V	L	G	R	N	E	L	V	S	D	G	S	G	R	V	A	A	K	D	T	G	E	R	E	E	L
Template Known Secondary structure																									T	S				T	T	S								S									S	S	S															S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		E	V	D	F	I	V	F	S	T	G	I	R	P	R	D	K	L	A	T	Q	C	G	L	D	V	A	P	R	G	G	I	V	I	N	D	S	C	Q	.	T	S	D	P	D	I	Y	A	I	G	E	C	A	S	W	N	N	R	V	F	G	L	V	A	P	G	Y	K	M	A	Q	V	A	V	D	H	I	L	G
Query Conservation																																								.
Alig confidence																	.	.	.	.																				.																	.	.	.
Template Conservation																	.	.	.	.																																					.	.	.
Template Sequence		P	A	Q	L	V	V	R	S	V	G	Y	R	G	V	P	.	.	.	.	T	P	G	L	P	F	D	D	Q	S	G	T	I	P	N	V	G	G	R	I	N	G	S	P	N	E	Y	V	V	G	W	I	K	R	G	P	.	.	.	T	G	V	I	G	T	N	K	K	D	A	Q	D	T	V	D	T	L	I	K
Template Known Secondary structure				S						S							.	.	.	.		T	T	S			B	T	T	T	T	B					T	T			T	T		S	S					T						S	.	.	.		S		T	T
Template Predicted Secondary structure																	.	.	.	.																																					.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.				.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions