Job Description P08201 Confidence 91.68% Date Thu Jan 5 11:00:55 GMT 2012 Rank 417 Aligned Residues 128 % Identity 16% Template c1gqqA_ PDB info PDB header:cell wall biosynthesis Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: murc - crystal structure of the apo-enzyme from haemophilus2 influenzae Resolution 3.1 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		V	R	L	A	I	I	G	N	G	M	V	G	H	R	F	.	I	E	D	L	L	D	K	S	D	A	A	N	F	D	I	T	V	F	C	E	E	P	R	I	A	Y	D	R	V	H	L	S	S	Y	F	S	H	H	T	A	E	E	L	S	L	V	R	E	G	F	Y	E	K	H	G	I	K	V	L	V	G	E	R	A
Query Conservation																	.
Alig confidence																	.									.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		Q	Q	I	H	F	I	G	I	G	G	A	G	M	S	G	I	A	E	I	L	L	N	E	G	.	.	.	.	Y	Q	I	S	G	S	D	I	A	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	T	Q	R	L	A	Q	A	G	A	K	I	Y	I	G	H	.	.
Template Known Secondary structure								S	T	T	S	T	T												T	.	.	.	.								S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T						S		.	.
Template Predicted Secondary structure																										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.																							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		I	T	I	N	R	Q	E	K	V	I	H	S	S	A	G	R	T	V	F	Y	D	K	L	I	M	A	T	G	S	Y	P	W	I	P	P	I	K	G	S	D	T	Q	D	C	F	V	Y	R	T	I	E	D	L	N	A	I	E	S	C	A	R	R	S	K	R	G	A	V	V	G	G	.	.	.	G	L	L	G	L	E
Query Conservation																																																																									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.																					.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	H	I	E	G	A	S	V	V	V	V	S	S	A	I	K	D	D	N	P	E	L	V	T	S	K	Q	K	R	I	P	V	I	Q	.	.	.	R	A	Q	M	L	A	E	I	M	R	F	R	H	G	I	A	V	A	G	T	H	G	K	T	T	T	T	A	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	T	T		S						S	S	S		T	T										T							.	.	.											T	S							S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
														71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	A	L	K	N	L	G	I	E	T	H	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	M	I	Y	T	Q	A	K	L	D	P	T	F	V
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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