Job Description P75966 Confidence 98.84% Date Thu Jan 5 12:16:33 GMT 2012 Rank 14 Aligned Residues 146 % Identity 13% Template d2apoa2 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase II TruB Resolution 1.95

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.		.	.	.
Predicted Secondary structure																																																																												.		.
Query SS confidence																																																																												.		.
Query Sequence		V	I	L	F	N	K	P	Y	D	V	L	P	Q	F	T	D	E	A	G	R	K	T	L	K	E	F	I	P	V	Q	G	V	Y	A	A	G	R	L	D	R	D	S	E	G	L	L	V	L	T	N	N	G	A	L	Q	A	R	L	T	Q	P	G	K	R	T	G	K	I	Y	Y	V	Q	V	E	.	G	.	I	P	T
Query Conservation																																																																												.		.
Alig confidence															.	.	.	.																																				.	.																					.		.
Template Conservation															.	.	.	.																																				.	.
Template Sequence		V	V	V	V	D	K	P	R	G	P	T	S	H	.	.	.	.	E	V	S	T	W	V	K	K	I	L	N	L	D	K	A	G	H	G	G	T	L	D	P	K	V	T	G	V	L	P	V	A	L	E	R	.	.	A	T	K	T	I	P	M	W	H	I	P	P	K	E	Y	V	C	L	M	H	L	H	R	D	A	S
Template Known Secondary structure									S	S	S				.	.	.	.										T	T		S					S	S				T	T										G	G	.	.	G	G	G	G	G	G	G	T	T	S	S											S	S
Template Predicted Secondary structure															.	.	.	.																																				.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190							.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.
Query Sequence		Q	D	A	L	E	A	L	R	N	G	V	T	L	N	D	G	P	T	L	P	A	G	A	E	L	V	D	E	P	A	W	L	W	P	R	N	P	P	I	R	E	R	K	S	I	P	T	S	W	L	K	I	T	L	Y	E	G	R	N	R	Q	V	R	R	M	T	A	H	V	G	F	P	.	.	.	.	.	.	T	L
Query Conservation																																																																										.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																												.	.												.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Sequence		E	E	D	I	L	R	V	F	K	E	F	T	G	R	I	Y	Q	R	R	I	.	.	.	.	.	.	.	.	.	.	.	.	R	K	I	H	E	L	E	L	L	D	K	D	G	K	D	V	L	F	R	V	K	C	Q	S	G	T	Y	.	.	I	R	K	L	C	E	D	I	G	E	A	L	G	T	S	A	H	M	Q
Template Known Secondary structure													S									.	.	.	.	.	.	.	.	.	.	.	.													T	T										T	T			.	.												T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140													.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	I	R	Y	A	M	G	D	Y	S	L	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	R	R	T	K	S	G	C	F	E	E	K	D
Template Known Secondary structure									T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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