Job Description P75966 Confidence 98.60% Date Thu Jan 5 12:16:33 GMT 2012 Rank 17 Aligned Residues 164 % Identity 18% Template d1r3ea2 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase II TruB Resolution 2.10

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		V	I	L	F	N	K	P	Y	D	V	L	P	Q	F	T	D	E	A	G	R	K	T	L	K	E	F	I	P	V	Q	G	V	Y	A	A	G	R	L	D	R	D	S	E	G	L	L	V	L	T	N	N	G	A	L	Q	A	R	L	T	Q	P	G	K	R	T	G	K	I	Y	Y	V	Q	V	E	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence															.	.	.	.																																				.	.																						.	.	.	.	.
Template Conservation															.	.	.	.																																				.	.
Template Sequence		I	L	V	A	Y	K	P	K	G	P	T	S	H	.	.	.	.	D	V	V	D	E	V	R	K	K	L	K	T	R	K	V	G	H	G	G	T	L	D	P	F	A	C	G	V	L	I	I	G	V	N	Q	.	.	G	T	R	I	L	E	F	Y	K	D	L	K	K	V	Y	W	V	K	M	R	L	G	L	I	T	E
Template Known Secondary structure									S	S	S				.	.	.	.										T	T		S					S	S				T	T										G	G	.	.	G	G	G	G	G	G	G	G	T	T	S											T				S
Template Predicted Secondary structure															.	.	.	.																																				.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
																116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.																	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	T	Q	D	A	L	E	A	L	R	N	G	V	T	L	N	D	G	P	T	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	L	V	D	E	P	A	W	L	W	P	R	N	P	P	I	R	E	R	K	S	I	P	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	D	I	T	G	E	V	V	E	E	R	E	C	N	V	T	E	E	E	I	R	E	A	I	F	S	F	V	G	E	Y	D	Q	V	P	P	A	Y	S	A	K	K	Y	K	G	E	R	L	Y	K	L	A	R	E	G	K	I	I	N	L	P	P	K	R	V	K	I	F	K	I	W	D	V	N	I	E	G	R	D
Template Known Secondary structure		S	S	B	T	T	S																					S	S	S									S	S	S	S				T	T									T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.
Predicted Secondary structure																										.	.	.	.	.	.																		.
Query SS confidence																										.	.	.	.	.	.																		.
Query Sequence		S	W	L	K	I	T	L	Y	E	G	R	N	R	Q	V	R	R	M	T	A	H	V	G	F	.	.	.	.	.	.	P	T	L	R	L	I	R	Y	A	M	G	D	Y	S	L	D	N	.	L	A	N	G	E	W
Query Conservation																										.	.	.	.	.	.																		.
Alig confidence														.	.											.	.	.	.	.	.																		.
Template Conservation														.	.
Template Sequence		V	S	F	R	V	E	V	S	P	G	T	Y	.	.	I	R	S	L	C	M	D	I	G	Y	K	L	G	C	G	A	T	A	V	E	L	V	R	E	S	V	G	P	H	T	I	E	E	S	L	N	V	F	E	A
Template Known Secondary structure										T	T			.	.												T	T	S													T	T			G	G	G		B		T	T	T	S
Template Predicted Secondary structure														.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions