Job Description P75966 Confidence 98.55% Date Thu Jan 5 12:16:33 GMT 2012 Rank 19 Aligned Residues 180 % Identity 15% Template c3uaiA_ PDB info PDB header:isomerase/chaperone Chain: A: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1-cbf5-nop10-gar1 complex from saccharomyces2 cerevisiae Resolution 3.06 Å

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		16	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure											.															.	.	.	.	.	.
Query SS confidence											.															.	.	.	.	.	.
Query Sequence		F	R	N	H	Q	V	K	R	F	.	S	S	Q	R	S	T	R	R	K	P	E	N	Q	P	.	.	.	.	.	.	T	R	V	I	L	F	N	K	P	Y	D	V	L	P	Q	F	T	D	E	A	G	R	K	T	L	K	E	F	I	P	V	Q	G	V	Y	A	A	G	R	L	D	R	D	S	E	G	L	L	V	L
Query Conservation											.															.	.	.	.	.	.
Alig confidence											.															.	.	.	.	.	.																.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		F	D	K	L	L	V	R	S	G	H	Y	T	P	I	P	A	G	S	S	P	L	K	R	D	L	K	S	Y	I	S	S	G	V	I	N	L	D	K	P	S	N	P	S	S	H	.	.	.	.	E	V	V	A	W	I	K	R	I	L	R	C	E	K	T	G	H	S	G	T	L	D	P	K	V	T	G	C	L	I	V
Template Known Secondary structure		G	G	G	S											S					S	T	T								T	T									S	S	S				.	.	.	.													S					S			S	S	S	S
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		T	N	N	G	A	L	Q	A	R	L	T	Q	P	G	K	R	T	G	K	I	Y	Y	V	Q	V	E	.	.	.	G	I	P	T	Q	D	A	L	E	A	L	R	N	G	V	T	L	N	D	G	P	T	L	P	A	G	A	E	L	V	D	E	P	A	W	L	W	P	R	N	P	P	I	R	E	R	K	S	I	P	T
Query Conservation																												.	.	.
Alig confidence				.										.														.	.	.																									.	.	.	.	.
Template Conservation				.										.																																									.	.	.	.	.
Template Sequence		C	I	.	D	R	A	T	R	L	V	K	S	.	Q	Q	G	A	G	K	E	Y	V	C	I	V	R	L	H	D	A	L	K	D	E	K	D	L	G	R	S	L	E	N	L	T	G	A	L	F	Q	R	P	P	.	.	.	.	.	L	K	R	Q	L	R	V	R	T	I	Y	E	S	N	L	I	E	F	D	N	K	R
Template Known Secondary structure				.	G	G	G	G	G	G				.			S	S											S	S			S	S	T										T										.	.	.	.	.																				T	T	T
Template Predicted Secondary structure				.										.																																									.	.	.	.	.
Template SS confidence
		105	.		.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		S	W	L	K	I	T	L	Y	E	G	R	N	R	Q	V	R	R	M	T	A	H	V	G	F	.	.	.	.	.	.	P	T	L	R	L	I	R	Y	A	M	G	D	Y	S	L	D	N
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	G	V	F	W	A	S	C	E	A	G	T	Y	M	R	T	L	C	V	H	L	G	M	L	L	G	V	G	G	H	M	Q	E	L	R	R	V	R	S	G	A	L	S	E	N	D
Template Known Secondary structure		T										T	T															S	S													T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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