Job Description P75966 Confidence 98.73% Date Thu Jan 5 12:16:33 GMT 2012 Rank 16 Aligned Residues 158 % Identity 15% Template c2ey4A_ PDB info PDB header:isomerase/biosynthetic protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of a cbf5-nop10-gar1 complex Resolution 2.11 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		V	I	L	F	N	K	P	Y	D	V	L	P	Q	F	T	D	E	A	G	R	K	T	L	K	E	F	I	P	V	Q	G	V	Y	A	A	G	R	L	D	R	D	S	E	G	L	L	V	L	T	N	N	G	A	L	Q	A	R	L	T	Q	P	G	K	R	T	G	K	I	Y	Y	V	Q	V	E	.	.	G	I	P	T
Query Conservation																																																																												.	.
Alig confidence															.	.	.	.																																		.										.														.	.
Template Conservation															.	.	.	.																																		.										.
Template Sequence		V	I	N	L	D	K	P	P	G	P	T	S	H	.	.	.	.	E	V	V	A	W	I	K	K	I	L	N	L	E	K	A	G	H	G	G	T	L	D	P	K	V	S	G	V	L	P	V	A	L	.	E	K	A	T	R	V	V	Q	A	.	L	L	P	A	G	K	E	Y	V	A	L	M	H	L	H	G	D	V	P
Template Known Secondary structure									S	S	S				.	.	.	.										T	T		S					S	S				T	T										.	G	G	G	G	G	G				.		T	T	S											S	S
Template Predicted Secondary structure															.	.	.	.																																		.										.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		Q	D	A	L	E	A	L	R	N	G	V	T	L	N	D	G	P	T	L	P	A	G	A	E	L	V	D	E	P	A	W	L	W	P	R	N	P	P	I	R	E	R	K	S	I	P	T	S	W	L	K	I	T	L	Y	E	G	R	N	.	.	.	.	.	R	Q	V	R	R	M	T	A	H	V	G	F	P	T	L	R
Query Conservation																																																													.	.	.	.	.
Alig confidence																								.																																					.	.	.	.	.									.
Template Conservation																								.																																																		.
Template Sequence		E	D	K	I	I	Q	V	M	K	E	F	E	G	E	I	I	Q	R	P	P	L	R	.	S	A	V	K	R	R	L	R	T	R	K	V	Y	Y	I	E	V	L	E	I	E	G	R	D	V	L	F	R	V	G	V	E	A	G	T	Y	I	R	S	L	I	H	H	I	G	L	A	L	G	.	V	G	A	H	M	S	E
Template Known Secondary structure											T	T	S									S	S	.	S		S																			T	T										T	T														T	S	.	S
Template Predicted Secondary structure																								.																																																		.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	R	Y	A	M	G	D	Y	S	L	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	R	T	R	S	G	P	F	K	E	D	E
Template Known Secondary structure								T	T			S	S	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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