Job Description P0ACU0 Confidence 99.67% Date Thu Jan 5 11:19:02 GMT 2012 Rank 107 Aligned Residues 154 % Identity 8% Template c3o60A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin0861 protein; PDBTitle: the crystal structure of lin0861 from listeria innocua to 2.8a Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																								.						.
Query SS confidence																								.						.
Query Sequence		M	T	I	K	G	E	Q	A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	.	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R
Query Conservation																								.						.
Alig confidence																								.						.
Template Conservation
Template Sequence		V	D	L	R	T	Q	K	T	Q	T	K	L	Y	T	V	L	E	R	F	Y	V	E	D	R	T	F	E	S	I	S	I	K	D	L	C	E	Q	A	R	V	S	R	A	T	F	Y	R	H	H	K	E	I	I	Q	V	I	E	V	Q	I	L	R	T	X	Q	Y	F	S	L	E	F	D	Q	I	I	L	T	K	E	N
Template Known Secondary structure																							T	T			T	T	T											T											S	S	T																					T	S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	A	Q	P	Q	P	D	R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	R	L	I	L	R	T	I	Q	K	N	P	L	L	F	Q	V	I	F	W	S	R	A	E	N	I	F	I	D	V	V	S	G	E	I	L	R	I	S	L	L	K	E	V	S	F	S	D	S	K	F	X	P	N	C	F	A	R	X	I	L	S	L	A	A	E	I	Q	Q	S	N	K	D	Y	T
Template Known Secondary structure																								T																				T	T				S	S	T	T																					S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions