Job Description P0ACU0 Confidence 99.57% Date Thu Jan 5 11:19:02 GMT 2012 Rank 122 Aligned Residues 132 % Identity 13% Template c3ljlB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator luxt; PDBTitle: the crystal structure of the full-length transcriptional regulator2 luxt from vibrio parahaemolyticus rimd 2210633. Resolution 3.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		T	I	K	G	E	Q	A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F
Query Conservation																												.
Alig confidence																												.																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	D	T	E	I	T	I	Q	K	I	X	D	A	V	V	D	Q	L	L	R	L	G	Y	D	K	X	S	Y	T	T	L	S	Q	Q	T	G	V	S	R	T	G	I	S	H	H	F	P	K	K	T	D	F	T	A	A	L	D	G	R	I	F	K	X	F	I	E	H	L	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							T														S	S											S	S	T									T							G	G	G		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	P	Q	P	D	R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A
Query Conservation
Alig confidence		.	.	.	.																				.
Template Conservation		.	.	.	.																				.
Template Sequence		.	.	.	.	E	F	E	K	G	L	D	A	F	S	Q	S	W	I	K	A	L	E	D	.	S	E	F	L	A	I	L	R	L	L	F	H	H	I	V	T	S	E	S	A	H	E	F	A	A	N	G	I	D	R	L	Y	K	X	V	E	S	Q	F	G	S	G	G	D	K
Template Known Secondary structure		.	.	.	.			S	S													T	T		.																		S	S																					G	G	G
Template Predicted Secondary structure		.	.	.	.																				.
Template SS confidence
						75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions