Job Description P0ACU0 Confidence 99.72% Date Thu Jan 5 11:19:02 GMT 2012 Rank 87 Aligned Residues 174 % Identity 13% Template c3knwB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator (tetr/acrr family); PDBTitle: crystal structure of a putative transcriptional regulator (tetr/acrr2 family member) from putative transcriptional regulator (tetr/acrr3 family) Resolution 2.45 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F	A	Q	P	Q	P	D
Query Conservation																						.
Alig confidence																						.																																																								.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		K	R	Q	H	I	L	D	S	G	F	H	L	V	L	R	K	G	F	V	G	V	G	L	Q	E	I	L	K	T	S	G	V	P	K	G	S	F	Y	H	Y	F	E	S	K	E	A	F	G	C	E	L	L	K	H	Y	I	S	D	Y	Q	I	R	L	N	Q	L	W	T	T	E	T	S	A	R	D	K	.	.	.	.
Template Known Secondary structure																			S	T	T									T	T				S	T	T						S																										S	S	S	S						.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R	.	.	M	I	L	H	T
Query Conservation																																																																											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	X	N	Y	L	Q	C	W	V	K	S	C	L	I	V	K	X	A	A	E	V	A	D	L	S	E	D	X	R	L	I	X	N	D	G	V	K	R	L	I	A	R	X	A	D	L	I	R	I	G	Q	Q	E	G	S	I	Q	T	S	V	V	P	D	V	L	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T										T	T	T	T	T	S																														T	S	S				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I	D
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		Q	V	I	Y	Q	X	Y	L	G	A	A	L	L	S	K	L	.	.	.	.	.	.	.	.	Y	K	H	K	A	P	L	F	Q	A	L	E	S	T	K	X	X	L	D
Template Known Secondary structure																		.	.	.	.	.	.	.	.		T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.									180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions