Job Description P0ACU0 Confidence 99.65% Date Thu Jan 5 11:19:02 GMT 2012 Rank 111 Aligned Residues 169 % Identity 11% Template c3kkcB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:tetr family transcriptional regulator; PDBTitle: the crystal structure of tetr transcriptional regulator from2 streptococcus agalactiae 2603v Resolution 2.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		M	T	I	K	G	E	Q	A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L
Query Conservation																													.
Alig confidence																													.																																															.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		K	D	R	Q	I	Q	K	T	K	V	A	I	Y	N	A	F	I	S	L	L	Q	E	N	D	Y	S	K	I	T	V	Q	D	V	I	G	L	A	N	V	G	R	S	T	F	Y	S	H	Y	E	S	K	E	V	L	L	K	E	L	C	E	D	L	F	H	H	L	F	K	Q	G	R	D	V	T	.	.	.	.	.	.
Template Known Secondary structure																						T	S	S		G	G	G											T											S	S																	S	S							.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	Q	P	Q	P	D	R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																										.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																										.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	Y	L	V	H	I	L	K	H	F	E	Q	N	Q	D	S	I	A	T	L	L	L	S	.	.	.	.	.	D	D	P	Y	F	L	L	R	F	R	S	E	L	E	H	D	V	Y	P	R	L	R	E	E	Y	.	.	.	.	.	I	T	K	V	D	I	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	T	S								.	.	.	.	.	T																T									.	.	.	.	.				T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																										.	.	.	.	.
Template SS confidence
															77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	L	H	T	H	A	L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		E	D	F	L	K	Q	F	L	L	S	S	F	I	E	T	L	K	W	W	L	.	.	.	.	.	.	.	.	H	Q	R	Q	K	X	T	V	E	D	L	L	K	Y	Y	L	T	X	V
Template Known Secondary structure																						.	.	.	.	.	.	.	.	T		T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.									.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions