Job Description P0ACU0 Confidence 99.75% Date Thu Jan 5 11:19:02 GMT 2012 Rank 73 Aligned Residues 172 % Identity 11% Template c3g56A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:regulator of macrolide 2'-phosphotransferase i; PDBTitle: structure of the macrolide biosensor protein, mphr(a) Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F	A	Q	P	Q	P	D
Query Conservation																						.
Alig confidence																						.																																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	D	E	V	L	E	A	A	T	V	V	L	K	R	C	G	P	I	E	F	T	L	S	G	V	A	K	E	V	G	L	S	R	A	A	L	I	Q	R	F	T	N	R	D	T	L	L	V	R	M	M	E	R	G	V	E	Q	V	R	H	Y	L	N	A	I	P	I	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T																													T	S											S																							S				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R	M	I	L	H	T	H	A
Query Conservation
Alig confidence		.	.																														.	.	.	.	.	.	.	.
Template Conservation		.	.																														.	.	.	.	.	.	.	.
Template Sequence		.	.	A	G	P	Q	G	L	W	E	F	L	Q	V	L	V	R	S	M	N	D	F	S	V	N	Y	L	I	S	W	Y	.	.	.	.	.	.	.	.	E	L	Q	V	P	E	L	R	T	L	A	I	Q	R	N	R	A	V	V	E	G	I	R	K	R	L	P	P	G	A	P	A	A	A	E	L	L	L	H	S	V
Template Known Secondary structure		.	.	S															T					T									.	.	.	.	.	.	.	.		T	T	S																					T			S	S			T	T
Template Predicted Secondary structure		.	.																														.	.	.	.	.	.	.	.
Template SS confidence
				77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I	D	L	I	L	Q	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	G	A	T	M	Q	W	A	V	.	.	.	.	.	.	.	.	.	.	.	.	D	P	D	G	E	L	A	D	H	V	L	A	Q	I	A	A	I	L	C	L	M	F	P	E
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	S			S																			S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.													160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions